Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1116 ATGTCAACACTGAACCATCTTCTTGGCCTTCCAGAGAAAATATGTTACGTTCAATGTGGATTCTGTACCACCATTTTAATGCTAAAACAGGGAAGTCCAGAAGAAGAAGCAAACAAGACTTTGGACAGCAGCCATAACCATAATGGAGGATCCATGATGATGACCTATTCTGATTGTGAGGAAGAAGATGCAATTCCCATGAGCATTGTGGCAAATAAACAAGAGATCAGAAGGCTAAAGGCTGAAAACCCAGACATGGCTCACAAAGAAGCTTTTAGCACAGCTGCCAAAAATTGGGCGTGCAAAGGAGATGAAGAAAGCTTCAGCCAGACAGAGCAACTTGTGGATCCTCATGAAGATGCTGAGGCTAAAGAAGAAGAAGAAGAGGAAGAGGAAGAGGAAGAGGAAGAAGGTTTCCGTGAAAGAAAGGTTCCAAGGAATTCAGTCTGGGCAAGGACACCATTTGAGTGA 471 0.4331 MSTLNHLLGLPEKICYVQCGFCTTILMLKQGSPEEEANKTLDSSHNHNGGSMMMTYSDCEEEDAIPMSIVANKQEIRRLKAENPDMAHKEAFSTAAKNWACKGDEESFSQTEQLVDPHEDAEAKEEEEEEEEEEEEEGFRERKVPRNSVWARTPFE 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1116 156 MobiDBLite consensus disorder prediction 121 137 - -
Lele50g1116 156 PANTHER PROTEIN YABBY 6-RELATED 73 101 IPR006780 GO:0007275
Lele50g1116 156 MobiDBLite consensus disorder prediction 102 156 - -
Lele50g1116 156 Pfam YABBY protein 72 100 IPR006780 GO:0007275
Lele50g1116 156 Coils Coil 118 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1116 Lele-ChrLele50 7330009 7331567 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1116 2 156 C2C2-YABBY Transcription Factor Family AT1G23420 31.556 4.83e-22 87.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Lele50g1116 YABBY 1.1e-13 CL0114