LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele50g1110	ATGGGAATAATCGGTTCGATTTTCTGGCTTCTGTGTTTGTTGTTGCTTCTGGCTTTCACAGAGATTTCTTCTGCCGCTCTTTCTCCTTCTGGGGTAAACTATGAAGTTGTTGCTTTGATTGCTATAAAGAATGATTTGGTTGATCCCCTCAATGTTTTGGATAGTTGGGATATTAATTCTGTCGACCCTTGTAGCTGGAGGATGGTTACTTGTTCTCCAGATGGCTACGTGTCTGCTTTGGGATTGCCTAGTCAGAACTTGTCTGGTACACTGTCTCCTGGAATCCCAAACCTAACAAACTTGCAGTCTGTGTTGCTTCAGAATAATGCCATTTCTGGTTCAATTCCTGCTGGGATAGGAAATCTGGAAATGCTTCAGACACTTGATCTTTCCAATAATGCTTTTAGTGGTGAGATACCCAGTTCTTTGGGAGGGCTAGAGAACCTGAATTATCTGAGGTTAAACAATAACAGCTTGACAGGAGTCTGCCCTCAGTCCCTTGGCAACATTAAGGGCCCAACTCTAGTGGACCTCTCTTATAACAATCTGAGCGGTCCGTTGCCAAGAATATCTGCAAGAACATTCAAGATTGTGGGCAATCCTTTGATTTGTGGTCCCACTGCTAATAACTGTTCAACTGTTCTGCCGGAGCCCCTTTCCTTCCCTCCAGATGCTATGAGGGCCCAATCAGACTCTGTAATAAAAAGCCAACGTGTTGCAATTGCTTTTGGTGCAAGTTTTGGCGGTGCATTTGTTATCGTGATTATTATTGGTTTCCTTGTTTGGTGGCGGTATAGACACAACCAGCAGATATTCTTTGATGTTAATGAGCAATATGATCCAGAAGTGCGCCTTGGCCATTTAAAAAGATACTCATTCAAAGAACTTCGAGCTGCAACAGACCATTTCAGTTCAAAGAACATTCTGGGAAGAGGTGGCTTTGGAATAGTCTACAAAGGGCGCTTGAATGATGGATCCATAGTGGCAGTGAAAAGGTTAAAGGACTATAATGCTGCTGCTGGAGAAAACCAATTTCAGACCGAAGTTGAGACAATTAGTTTGGCCATCCACCGGAATCTTCTTAGGCTTTGTGGTTTTTGCAGTACTCAGAATGAAAGGCTCCTTGTTTATCCATACATGCCTAATGGCAGCGTAGCCTCTCGATTAAAAGATCATATTCGTGGTGAGCCGGCTTTAGATTGGGTGAGGCGAAAGAGAATAGCTTTAGGACAATCATCAGATAAGACCGATGTGTTTGGGTTTGGAATCTTGCTTCTTGAGCTCATCACAGGGCACAAGGCCTTGGATTTTGGAAAAGCTACTAACCAGAAAGGTGTAATGCTTGATTGGGTTAAGAAGCTCCATCAAGAACGAAGATTAACTCAAATGGTGGATAAGGATTTGAATGGAGATTTTGACTTGATTGAACTAGGAGAAATGGTTCATGTTGCATTATTGTGTACACAATTTAATCCTCATCAACGTCCCAAGATGTCTGAAGTATTAAAGATGCTGGAAGGGGATGGTTTAGGAGAGAGATGGGAGGTTTCACAGAAGCTTGATACATCAAAGTTGCAGTGCAGTGAAAACCCTACTCCTCAGAGATATTCAGATTTCATAGAAGACTCTTCACTCCTAGTAGAAGCTATGGAGCTTTCTGGGCCTAGGTGA	1671	0.4273	MGIIGSIFWLLCLLLLLAFTEISSAALSPSGVNYEVVALIAIKNDLVDPLNVLDSWDINSVDPCSWRMVTCSPDGYVSALGLPSQNLSGTLSPGIPNLTNLQSVLLQNNAISGSIPAGIGNLEMLQTLDLSNNAFSGEIPSSLGGLENLNYLRLNNNSLTGVCPQSLGNIKGPTLVDLSYNNLSGPLPRISARTFKIVGNPLICGPTANNCSTVLPEPLSFPPDAMRAQSDSVIKSQRVAIAFGASFGGAFVIVIIIGFLVWWRYRHNQQIFFDVNEQYDPEVRLGHLKRYSFKELRAATDHFSSKNILGRGGFGIVYKGRLNDGSIVAVKRLKDYNAAAGENQFQTEVETISLAIHRNLLRLCGFCSTQNERLLVYPYMPNGSVASRLKDHIRGEPALDWVRRKRIALGQSSDKTDVFGFGILLLELITGHKALDFGKATNQKGVMLDWVKKLHQERRLTQMVDKDLNGDFDLIELGEMVHVALLCTQFNPHQRPKMSEVLKMLEGDGLGERWEVSQKLDTSKLQCSENPTPQRYSDFIEDSSLLVEAMELSGPR	556

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele50g1110	556	Gene3D	Ribonuclease Inhibitor	32	213	IPR032675	-
	Lele50g1110	556	SUPERFAMILY	Protein kinase-like (PK-like)	288	508	IPR011009	-
	Lele50g1110	556	FunFam	Somatic embryogenesis receptor kinase 1	272	379	-	-
	Lele50g1110	556	Pfam	Leucine rich repeat N-terminal domain	33	72	IPR013210	-
	Lele50g1110	556	SMART	LRR_typ_2	98	121	IPR003591	-
	Lele50g1110	556	SMART	LRR_typ_2	122	145	IPR003591	-
	Lele50g1110	556	SMART	LRR_typ_2	146	169	IPR003591	-
	Lele50g1110	556	Gene3D	Phosphorylase Kinase; domain 1	272	379	-	-
	Lele50g1110	556	ProSiteProfiles	Protein kinase domain profile.	303	556	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele50g1110	556	SUPERFAMILY	L domain-like	33	193	-	-
	Lele50g1110	556	Pfam	Protein kinase domain	304	392	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele50g1110	556	Gene3D	Transferase(Phosphotransferase) domain 1	409	524	-	-
	Lele50g1110	556	ProSitePatterns	Protein kinases ATP-binding region signature.	309	331	IPR017441	GO:0005524
	Lele50g1110	556	PANTHER	SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1	410	515	-	-
	Lele50g1110	556	FunFam	Putative LRR receptor-like serine/threonine-protein kinase	32	213	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele50g1110	Lele-ChrLele50	7269216	7272812	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele50g1110	68	556	Receptor kinase-like Gene Family	AT1G60800	57.645	0.0	552

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-II	Lele50g1110		Pkinase	3.6e-13	CL0016