Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1078 ATGGTTGGACCCTCCATACCTCCTAAATCTACCCTCAAGTTCCTCTGTAGCTACGGCGGCAAAATCCTTCCTCGCTATCCCGACGGCAAGCTCCGTTATATAGGTGGCCATACACGTGTCCTCTCCGTCGACCGCTCTATTCCCTTTTCCGAGCTGTTGGTGAAGTTGGGAGAGCTCTGTGGCTTGGAAGTTGTGACAGTTCGCTGTCAATTGCCTACCGAAGATCTCGATGCTTTGGTATCCATCAGCTCCGACGAGGATCTGGCGAATCTGATCGAGGAATACGATCTCGTTGCTCCGCCGTCATCTTTAAAGATTAGAGCGTTCCTTTCGCCGCCGAAATCGGTCCAGAAAAAGGATTCTATTCCGCCCTCGTCGTTTATGTCAAAATCGTCATCATCTTCATCTACGTCGTCGTCGTCACCTCACAATTCTACTGCTGGTAGCTGTGGATGTTCTACTTGTGGCGGCAGCCCGAGGAATTCGGTGTTGGTGACTCCGGTCGTCTTTCGATGTGTACGTCAGATGCCGGCGCCGATTGCGTATGACATGAGAAAATCTGCCGGAAAGAATATTCCTCTTCCTCACTATGCTTACCCAACTCAGAGAAACCCAGGCCACATTTGCGTCATCCACAACGGGAACCACTGGCAATAG 657 0.5114 MVGPSIPPKSTLKFLCSYGGKILPRYPDGKLRYIGGHTRVLSVDRSIPFSELLVKLGELCGLEVVTVRCQLPTEDLDALVSISSDEDLANLIEEYDLVAPPSSLKIRAFLSPPKSVQKKDSIPPSSFMSKSSSSSSTSSSSPHNSTAGSCGCSTCGGSPRNSVLVTPVVFRCVRQMPAPIAYDMRKSAGKNIPLPHYAYPTQRNPGHICVIHNGNHWQ 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1078 218 MobiDBLite consensus disorder prediction 118 145 - -
Lele50g1078 218 SUPERFAMILY CAD & PB1 domains 28 116 - -
Lele50g1078 218 MobiDBLite consensus disorder prediction 115 145 - -
Lele50g1078 218 Gene3D - 30 110 - -
Lele50g1078 218 SMART PB1_new 26 111 IPR000270 GO:0005515
Lele50g1078 218 Pfam PB1 domain 28 111 IPR000270 GO:0005515
Lele50g1078 218 CDD PB1_UP2 15 110 - -
Lele50g1078 218 PANTHER OS05G0427100 PROTEIN-RELATED 7 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1078 Lele-ChrLele50 6972401 6973230 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1078 12 122 MAP Kinase Kinase Kinase AT3G46920 49.123 2.40e-27 107