Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1075 ATGGAAGAAGCTTTCAGGCGTCTCAACGGCCATGATTCCAACGACTCCTTCTCCAATCACCACCACCACCGCAAGAAGTGCGCCTCGGCAGCCAACAAGAGGCCTTCCAGAGATAACGGCCCTGTCGGTGCTATGAGGTACCGTGGAGTTAGGCGTAGGCCCTGGGGCCGTTACGCCGCCGAGATAAGGGACCCTCTGTCCAAGGAGCGGCGTTGGCTCGGTACCTTTGACACGGCGGAGGAAGCCGCTTGTGCTTACGACTGCGCCGCCCGAGCAATGCGTGGCCTTAAAGCTCGTACCAACTTCGTGTACCCAACTTCCGCTCCTCCGTACTCTGTTCCTTACAATCTCTTACCTCCTTCCTTCAACTTCCCCAAACAATCTCAGACTTCGTCCGTTAATATTAACAAGAACCTCCATAGCCACCACCATGTGGGAGCTTCTAGTTGGTCCAACCCTCGTACCTGTACTTCAACCCACCGAAACTCTACCTCGAACGTGATTATGCACCCTGATGTTCTCAACCCTGCTGTGGTTCCTTCTTCTTCATCATCGCCCTCGTCTTCGACCTGTCCCACGTGTACTTGTCTCCAAGGTTGCTGTCCGATGAACTCTTCTGGTGGCACTAATACTGGTACTAGTAGCACAAGTGGGTCTGCTTCCGTCTCCATGACCACAAGCCATAATAATAATGTAATGATAACTAAGAGCGATTGTGAAGCTGATGAAGAATTTGCGTTCTTTCCTAGAGAAGCTTCAGACTCGGGGTTATTGGAGGAGATAGTTCATAAATTTATGTTAAGTTCGAAGAAGCCCAAGAAATTTGAGACGACTCTCCCAGAATTCCCCCCTCCGAGTCAGACTCAGACTCAGACTCAGACTCAGTCTCAGACTCAGTCAGTGCCAGATCCTACGTTCGTTTCTGCTTCTCAGTGCTATTACGTAACCAAGAAAGAGGATTTTGGTGTGTATTTGGACGATGACCAAGGTTTTGTTCCCATGCAGCAGCAACAACAGCAATTTGAGGGTTCTGAGGAGCAGGCTATGCATTTCGGCAACTACGGTTATCAGTTGATGAATAATAACCATGCAGATTTCTCAATCACGCGAGATCTTGTTCGTTATGAAGAGATTCTTAATGCCTTTGCAACCAGTGTCCAAAATGCTTAA 1170 0.4923 MEEAFRRLNGHDSNDSFSNHHHHRKKCASAANKRPSRDNGPVGAMRYRGVRRRPWGRYAAEIRDPLSKERRWLGTFDTAEEAACAYDCAARAMRGLKARTNFVYPTSAPPYSVPYNLLPPSFNFPKQSQTSSVNINKNLHSHHHVGASSWSNPRTCTSTHRNSTSNVIMHPDVLNPAVVPSSSSSPSSSTCPTCTCLQGCCPMNSSGGTNTGTSSTSGSASVSMTTSHNNNVMITKSDCEADEEFAFFPREASDSGLLEEIVHKFMLSSKKPKKFETTLPEFPPPSQTQTQTQTQSQTQSVPDPTFVSASQCYYVTKKEDFGVYLDDDQGFVPMQQQQQQFEGSEEQAMHFGNYGYQLMNNNHADFSITRDLVRYEEILNAFATSVQNA 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1075 389 MobiDBLite consensus disorder prediction 1 45 - -
Lele50g1075 389 CDD AP2 46 102 IPR001471 GO:0003700|GO:0006355
Lele50g1075 389 MobiDBLite consensus disorder prediction 275 302 - -
Lele50g1075 389 SUPERFAMILY DNA-binding domain 46 103 IPR016177 GO:0003677
Lele50g1075 389 ProSiteProfiles AP2/ERF domain profile. 46 103 IPR001471 GO:0003700|GO:0006355
Lele50g1075 389 FunFam Ethylene-responsive transcription factor 2 45 104 - -
Lele50g1075 389 PANTHER AP2 DOMAIN CLASS TRANSCRIPTION FACTOR 28 253 - -
Lele50g1075 389 MobiDBLite consensus disorder prediction 1 19 - -
Lele50g1075 389 SMART rav1_2 46 109 IPR001471 GO:0003700|GO:0006355
Lele50g1075 389 Pfam AP2 domain 46 95 IPR001471 GO:0003700|GO:0006355
Lele50g1075 389 PRINTS Ethylene responsive element binding protein signature 69 85 IPR001471 GO:0003700|GO:0006355
Lele50g1075 389 PRINTS Ethylene responsive element binding protein signature 47 58 IPR001471 GO:0003700|GO:0006355
Lele50g1075 389 Gene3D AP2/ERF domain 45 104 IPR036955 GO:0003700|GO:0006355
Lele50g1075 389 MobiDBLite consensus disorder prediction 281 302 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1075 Lele-ChrLele50 6955268 6956437 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1075 1 295 AP2-EREBP Transcription Factor Family AT1G24590 35.556 4.18e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele50g1075 AP2 1.1e-11 CL0081