Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1070 ATGGAAGCTGCAACCCAGAAAAAACTCAGAGTGCTCTGCCTCCATGGATTCAGGACCAGTGCTAACATCCTCCACAAGTTGATCGGAAGATGGCCGGACTCTGTTCTCCAGAAGCTAGATCTCGTCTTCCTCGACGGGCCCTTTCCGGCGCAGGGCAAATCTAGCGCTGAAGGCATCTATGATCCTCCTTACTTTGAATGGTTCCAAGCAAAAGACGAGGATTTCACAGATTTCTTCAACTTCGAAGAATGCCTAGCTTACATTGAAGATTACATGGTGAAAAACGGTCCTTTTGACGGTTTACTTGGATTCTCTCAGGGTGCTGTCTTATCAGCCGCAATTCCCGGAATGCAATCGCAGGGTTTGACACTTGGGAAAGTAGAGAAGATAAAGTTTTTGATCCTGATATCAGGAGCCAAGTTTGGGGGAAATATGTACGCAGCGCCTAAATTGGCTACCAATGCATTTTCAAAACCAATTGACATCCCATCTCTCCACTTCATTGGTGAAGAGGACTTCCAGAAGGAAGAGGGGATTGCATTACTGGATGCATTTGTGGAGCCGCTAGTGATTCATCATCCAAAAGGACACACAATCCCCAAGCTGGATGATAAGGGTCTCGAAACTATGCTGGCCTTCATTGCCAAGATTCAGAGCTTGCCATCAAAATCTTCAAGACCTGGGGACCAGGGGCTGCGTGCGACCTGGGCTGGGCAGGGCAGGGTCATGGAAAGTCTTGAGCCGAGGCGCCCCTCCTCTTGTTCGCGCTAG 771 0.4903 MEAATQKKLRVLCLHGFRTSANILHKLIGRWPDSVLQKLDLVFLDGPFPAQGKSSAEGIYDPPYFEWFQAKDEDFTDFFNFEECLAYIEDYMVKNGPFDGLLGFSQGAVLSAAIPGMQSQGLTLGKVEKIKFLILISGAKFGGNMYAAPKLATNAFSKPIDIPSLHFIGEEDFQKEEGIALLDAFVEPLVIHHPKGHTIPKLDDKGLETMLAFIAKIQSLPSKSSRPGDQGLRATWAGQGRVMESLEPRRPSSCSR 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1070 256 SUPERFAMILY alpha/beta-Hydrolases 6 216 IPR029058 -
Lele50g1070 256 MobiDBLite consensus disorder prediction 221 256 - -
Lele50g1070 256 Gene3D alpha/beta hydrolase 4 219 IPR029058 -
Lele50g1070 256 PANTHER OVARIAN CANCER GENE-2 PROTEIN-RELATED 2 224 - -
Lele50g1070 256 Pfam Serine hydrolase (FSH1) 7 204 IPR005645 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1070 Lele-ChrLele50 6879483 6881666 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1070 5 200 Sulfurtransferasese or Rhodanese AT1G09280 28.319 9.47e-19 83.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1070 50 6879483 6881666 Lele51g1006 51 6358605 6360363 hybridization
Lele50g1070 50 6879483 6881666 Lele52g1034 52 6828098 6829880 hybridization