Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1066 ATGGCAGACAACGTGGACCCTGTGACTTCAAACCTTCTGTGTTTGGAAAACAGCAATCCATGCTTTGACAATTCCGAATGTAATATCGTGGATGAGTTTGGAATTTCTTTTAACCAACAAAACGATAAGGGACGTCATCATTGTCCGCCTTGGGATAGCCATGGATCCGTGTGTTTTCCAATTCAGAGTGATGAAAGAGTCAGACTAATGGTTGAGAAGGAGAAAGAGCATTTGCCCAGAAGTGATTACCTGAAGAGGCTGCGTAGTGGAGACCTGGAGTTGAGTGTTAGGAGGAAGGCTCTTGATTGGATTTTGAAGGCTCATGCCTATTATGGTTTTGGTCCATTGAGCTTTTGTCTATCAGCGAACTACTTGGATCGATTCCTATCAATATATGAGTTGCCTAGAGGTAAATCATGGACCGTGCAATTGCTAGCTGTGGCTTGTTTGACATTGGCAGCTAAAATGGAGGAGATTGAAGTGCCCCTCTTAGTAGATTTACAGGTTGGAGAACCAAAGTTTGTTTTTGAAGCTAAAACCATTGAAAGAATGGAGCTACTAGTGTTAAGCACATTGAGATGGAAAATGAACTCTTTAACTCCTTGTTCCTTCATAGACTACTTCCTCAGTAAACTCACTACTGGGAAGCATCCAACAAATTCATCCATTTCAAGATCAATACAGCTCATAGTTGGCACAATTAGGGGTATTGACTTCTTGGACTTCATGCCTTCTGAAATTGCTGCAGCAGTGGCTATTTCTGTTACAAAGGAACTGCAAATGCAAACAATTGAGATTGACAAGGTCATCTCTGTTTTAATGATGGAGGAAAAGAGAGTTCTCAAGTGTCTTGAACTGATAAGAGACTTGTCCTTGATGAGTGTTTCTGCAAGTTTGAGCAGAAACTTAATGCCATTGGTGCCACAAAGCCCAGATGGGGTTCTGGATGCTGCATGCTTGAGCTACAAAAGTGATGAATTAACTGTTGGGTCATATCAAAACTCTTCACACAATACTGGTAACGCTAAGAGGACCAAATCAGAAAGACCTTCTGATGGGACTTTCAAGTCATAA 1074 0.4143 MADNVDPVTSNLLCLENSNPCFDNSECNIVDEFGISFNQQNDKGRHHCPPWDSHGSVCFPIQSDERVRLMVEKEKEHLPRSDYLKRLRSGDLELSVRRKALDWILKAHAYYGFGPLSFCLSANYLDRFLSIYELPRGKSWTVQLLAVACLTLAAKMEEIEVPLLVDLQVGEPKFVFEAKTIERMELLVLSTLRWKMNSLTPCSFIDYFLSKLTTGKHPTNSSISRSIQLIVGTIRGIDFLDFMPSEIAAAVAISVTKELQMQTIEIDKVISVLMMEEKRVLKCLELIRDLSLMSVSASLSRNLMPLVPQSPDGVLDAACLSYKSDELTVGSYQNSSHNTGNAKRTKSERPSDGTFKS 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1066 357 FunFam D6-type cyclin 194 285 - -
Lele50g1066 357 Pfam Cyclin, N-terminal domain 68 197 IPR006671 -
Lele50g1066 357 SMART Cyclin_C_2 199 323 IPR004367 -
Lele50g1066 357 Pfam Cyclin, C-terminal domain 200 298 IPR004367 -
Lele50g1066 357 SUPERFAMILY Cyclin-like 57 197 IPR036915 -
Lele50g1066 357 Gene3D - 80 197 - -
Lele50g1066 357 CDD CYCLIN 97 189 IPR013763 -
Lele50g1066 357 PANTHER CYCLINS 65 288 IPR039361 -
Lele50g1066 357 FunFam D2/4-type cyclin 80 193 - -
Lele50g1066 357 MobiDBLite consensus disorder prediction 342 357 - -
Lele50g1066 357 Gene3D - 70 285 - -
Lele50g1066 357 SMART cyclin_7 102 190 IPR013763 -
Lele50g1066 357 MobiDBLite consensus disorder prediction 330 357 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1066 Lele-ChrLele50 6845147 6847198 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1066 62 260 Core Cell Cycle Gene Families AT5G65420 63.184 5.39e-91 272