Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele50g1057 | ATGCCTGCAGATTTTCCTCAGTGTGGGATTCTTCTTTTGCTTCATTTCGTTCATTGTCTCGTATCGGAGAGGATTCAGATTAAGAAGATCGACAACGCTACGGCAAGGCAAGTGACGTTCTCCAAGCGACGCAGAGGGCTCTTCAAAAAAGCTGAGGAGCTTTCTGTCCTCTGTGATGCGGATGTTGGCCTCATCGTCTTCTCCACAACTGGGAAGCTCTTTGAGTACTCCAGCACAAGCATGAAGGAAATACTCGACAGGTATCATTTGCTCTCGAAGAACCTATCGAAACAAGAACTATCGTCTCTTGAATTGCAGCTAGTTGAGAACAGTAACACCAGCTTGAGCAAGGAAGTTGCTGAGAAGACCCGTCAACTAAGGCGGATGAGAGGAGAAGATCTGCAAGGTTTAAATATCGAGGAATTGCAGCAACTAGAGAGGTCTCTCGAATCTGGATTGGGCCGTGTAATAGAAAAGAAGGAAGAGAAGATAATGACTGAGATAAGTGATCTCAAGAGAAAGGGAGTGGAGTTGATGGAAGAGAACGAGATGTTAAAGCGTCAAGTGGAACAATTATGTGATGGCAATAGGCATGGTGGTGCCGAGTCCGAAATCCTAAACAACGAGGAAGGTCAGTCATCAGAATCTGTCACTATCGTCTGCAACTCCATGGGACCCCCGCAAGACTACGACAGCTCAGACACATCGCTCAAGCTTGGGTGA | 723 | 0.4661 | MPADFPQCGILLLLHFVHCLVSERIQIKKIDNATARQVTFSKRRRGLFKKAEELSVLCDADVGLIVFSTTGKLFEYSSTSMKEILDRYHLLSKNLSKQELSSLELQLVENSNTSLSKEVAEKTRQLRRMRGEDLQGLNIEELQQLERSLESGLGRVIEKKEEKIMTEISDLKRKGVELMEENEMLKRQVEQLCDGNRHGGAESEILNNEEGQSSESVTIVCNSMGPPQDYDSSDTSLKLG | 240 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele50g1057 | 240 | MobiDBLite | consensus disorder prediction | 206 | 240 | - | - | |
Lele50g1057 | 240 | PRINTS | MADS domain signature | 57 | 78 | IPR002100 | GO:0003677|GO:0046983 | |
Lele50g1057 | 240 | PRINTS | MADS domain signature | 42 | 57 | IPR002100 | GO:0003677|GO:0046983 | |
Lele50g1057 | 240 | PRINTS | MADS domain signature | 22 | 42 | IPR002100 | GO:0003677|GO:0046983 | |
Lele50g1057 | 240 | FunFam | Transcription factor, MADS-box | 32 | 102 | - | - | |
Lele50g1057 | 240 | Coils | Coil | 105 | 132 | - | - | |
Lele50g1057 | 240 | ProSiteProfiles | MADS-box domain profile. | 20 | 80 | IPR002100 | GO:0003677|GO:0046983 | |
Lele50g1057 | 240 | SMART | madsneu2 | 20 | 79 | IPR002100 | GO:0003677|GO:0046983 | |
Lele50g1057 | 240 | ProSitePatterns | MADS-box domain signature. | 22 | 76 | IPR002100 | GO:0003677|GO:0046983 | |
Lele50g1057 | 240 | MobiDBLite | consensus disorder prediction | 196 | 240 | - | - | |
Lele50g1057 | 240 | Gene3D | - | 32 | 115 | IPR036879 | GO:0003677|GO:0046983 | |
Lele50g1057 | 240 | Pfam | SRF-type transcription factor (DNA-binding and dimerisation domain) | 29 | 76 | IPR002100 | GO:0003677|GO:0046983 | |
Lele50g1057 | 240 | CDD | MADS_MEF2_like | 24 | 94 | IPR033896 | GO:0000977|GO:0045944 | |
Lele50g1057 | 240 | ProSiteProfiles | K-box domain profile. | 105 | 195 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Lele50g1057 | 240 | Coils | Coil | 168 | 188 | - | - | |
Lele50g1057 | 240 | Pfam | K-box region | 110 | 189 | IPR002487 | GO:0003700|GO:0005634|GO:0006355 | |
Lele50g1057 | 240 | PANTHER | SERUM RESPONSE FACTOR HOMOLOG | 24 | 200 | - | - | |
Lele50g1057 | 240 | SUPERFAMILY | SRF-like | 24 | 94 | IPR036879 | GO:0003677|GO:0046983 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele50g1057 | Lele-ChrLele50 | 6788793 | 6793216 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele50g1057 | 20 | 240 | MADS-box Gene Family | AT2G22540 | 63.830 | 2.85e-96 | 280 |