Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1043 ATGGAATCATTAGAGAAGCACAGAAGAGAGTTTTCCGGCGACGATCAGGAGTCACCAAGAGGTATACTGGAAATCCCTGTTTCGGGCACAGAATCTGATCACAGCGGAAGCAGCAGCTACAGCTCAAGCTTGCCAGAGAAGTCATCGGAGACGGAGAGAGTGAACGTGAGGGAAGGGCTGGGACAGCCATGGAGGGCGATGATAGAATCATGGAAGAAGAAGTCAGTTCGGAGAATATCGGCGATTTCATTACTTGCAGCGAGCTACGAGATGTCGAGGAAGAGCTTGAGGAAGAGGAGGATGGAACGGATTCGAAGCGCAGAAGAAAGGATCAATCTGGAAGCGATACCTACAAAGCCTTCATGGAGGAACTTCGATTACGCAGAGCTCCAAGCTGCAACAGACGATTTCAATCCTGAGAACCTGATTGGACAAGGTGGGCATGCTGAAGTCTACAGAGGACGCTTACCGGATGGTCAACTTGTGGCAGTGAAGAGGCTAATGAAGAAAGACAAGGAAAACGAGGACAGAGTGGGTGATTACTTATCAGAGCTAGGCATTATCGCCCACATAAACCACCCAAATGCTGTGCGTTTGATTGGGTTTGGGGTCAACAATGGTTTCTACTTTGTGTTGCAACTAGCTCCACATGGCAGCCTTTCTTCTCTGCTCTTTGGTTCTGAATGCTTGGAATGGAAGATAAGGTTCAAGGTAGCTATTGGTGTGGCACAGGGATTGGGATACCTGCATCATGATTGCCAAAGACGAATCATTCACAGAGACATCAAGGCCTCCAACATATTACTAAACGAAAATTACGAAGCTGAGATTTCAGATTTTGGACTTGCGAAATGGCTTCCGGAGAGGTGGACTCAACATGTTGTCTTCCCAATAGAAGGCACATTCGGGTATTTGGCTCCAGAGTATTTTATGCATGGAATTGTTGATGAGAAGACTGATGTATTCGCCTATGGGGTTTTGCTGCTGGAACTCATTACAGGTCGTCGTGCAGTTGATTCATGCAGCAAGCAAAGTCTTGTCCTCTGGGCAAAACCAAGACTAGAAGAACACGATGTGAAGGAATTAGTAGACCCACGATTAGGAGAAGCTTACGATTGCATTGAATTGAAGAGGACCATGCTTACTGCTTCCATGTGTCTCCACCACTCATCCTCCCACCGTCCATACATGAAACAGGTAGTGCTGCTGCTGAAGGGTGAAGAGGGACTCGTTGATGTCAAGCAGAAATCAGTACCAACAAGATCCATCTTGTTAGATGCCAGTGACCTCGAAGAATATACTTGCTCTACTTACTTGAACGATCTCAATCGTCACAGGCAACTAGTCATGGAGTGA 1356 0.4683 MESLEKHRREFSGDDQESPRGILEIPVSGTESDHSGSSSYSSSLPEKSSETERVNVREGLGQPWRAMIESWKKKSVRRISAISLLAASYEMSRKSLRKRRMERIRSAEERINLEAIPTKPSWRNFDYAELQAATDDFNPENLIGQGGHAEVYRGRLPDGQLVAVKRLMKKDKENEDRVGDYLSELGIIAHINHPNAVRLIGFGVNNGFYFVLQLAPHGSLSSLLFGSECLEWKIRFKVAIGVAQGLGYLHHDCQRRIIHRDIKASNILLNENYEAEISDFGLAKWLPERWTQHVVFPIEGTFGYLAPEYFMHGIVDEKTDVFAYGVLLLELITGRRAVDSCSKQSLVLWAKPRLEEHDVKELVDPRLGEAYDCIELKRTMLTASMCLHHSSSHRPYMKQVVLLLKGEEGLVDVKQKSVPTRSILLDASDLEEYTCSTYLNDLNRHRQLVME 451
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1043 451 ProSiteProfiles Protein kinase domain profile. 137 410 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1043 451 MobiDBLite consensus disorder prediction 30 49 - -
Lele50g1043 451 ProSitePatterns Protein kinases ATP-binding region signature. 143 165 IPR017441 GO:0005524
Lele50g1043 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
Lele50g1043 451 FunFam receptor-like cytosolic serine/threonine-protein kinase RBK2 216 418 - -
Lele50g1043 451 MobiDBLite consensus disorder prediction 1 56 - -
Lele50g1043 451 Pfam Protein kinase domain 140 345 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g1043 451 PANTHER OS08G0249100 PROTEIN 12 418 - -
Lele50g1043 451 Gene3D Transferase(Phosphotransferase) domain 1 216 418 - -
Lele50g1043 451 FunFam Receptor-like cytosolic serine/threonine-protein kinase RBK1 111 214 - -
Lele50g1043 451 Gene3D Phosphorylase Kinase; domain 1 107 212 - -
Lele50g1043 451 MobiDBLite consensus disorder prediction 1 17 - -
Lele50g1043 451 SUPERFAMILY Protein kinase-like (PK-like) 118 404 IPR011009 -
Lele50g1043 451 SMART serkin_6 137 392 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1043 Lele-ChrLele50 6700955 6704068 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1043 121 427 Trihelix Transcription Factor Family AT5G38560 42.138 1.11e-69 232
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Lele50g1043 Pkinase 2e-39 CL0016