LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele50g1031	ATGTTATTCGTCTGCTTCTTGCGGTTGCTGATTGGTTTCCTGTTATATACATTTCATTTTTCAGGCTTCTTTTAACTGCAGTCTACTCCAAGGCATTTGTACAACCTCAAAGCAAAGATTCGTCAGGGAAATCTATCAGAGAAAACTTTCAAGTCATGGAACCCAAACAAATATTTTCCTGTCGAAACAGACCATACTCCATCTGGTGGTTCATCAATGCAAAACTACCAGCCGCTGAAGGTTCCTAATTTTATTGGGGGGAGATATATAGACTCAGAGAGTTGTGGAATTCTTGATGTTACAAATCCTGCAACACAAGAAGTTGTGTCTCAAGTTCCTTTAACTACTTATGAAGAGTTCAAAGCTGCAGTTAAAGCAGCCAAGCAAGCTTTTCCGGCATGGAAAAACACTCCAAGCACCACTCGCCATCGTATCATGTTTAAGTTCCGGGAACTTATCTATAGGGACATTGATAAGCTTGCCATGAATATCACCATAGAGCAGGGCAAGACTTTGAAAGGCGCTCAAAGAGATGTGCTCCATGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGTCCAATCTTCAAATGGGGGAATTTGTCCCTAATGCTTATGATGGAATTGATACATACTGCATAAGAGAACCCCTTGGAGTTTGTGCTGGAATATGCCCTGTCAACTTTCCAGCAATGATACCCTTGTGGATGTTCCCTATAGCGGTTGCATGTGGCAACACGTTTATTCTCAAGCCATGTGAGAAGAATCCAGGGGCTTCAATGATACTTGCAGCACTAGCAATGGAAGCGGGTTTGCCAGATGGTGTATTAAACATTGTTCATGGTACCCATGAGATTTTGAATTACATACGTGATGATGAGGATATAAAAGCTGTATCATTTGTGGGTCCAGTTGTGGCTGGAATGCACATATATGCCAGGGCTGCTGCTAGAGGGAAACGTGTTCAGTCCAATACACGCAGCAAAAATCACGCGGTTGTCATGCCAGATGCTAGCATGGGTGCTACTCTAGATGCTCTTATTGCTGCTTCCTTTGGTGCTGCGGGAGAGGGATGCATGACCCTAAGCACAGCTATTTTTGTTGGAGGATCATTGCCATGGGAACAAGAACTTGTGCAACGTGCCAAAGTACTTAAAGTGAATGCAGGAACAGAGCCTAGTGCCGATCTTGGTCCAGTTATTAGCAAAGAGGCAAAGGATCAGATATGTAGATTAGTTCAGAGCAGTGTTGAAAATGGTGCAAGGCTACTGCTTGATGGAAGACATATTGTGGTACCAGGATATGAGAATGGGAACTTTGTTGCCCCTACAATTTTATGCGATATTACAATCGACATGGAGTGCTACAAGGAAGAAGTTTTTGGACCAGTTCTTCTCTGCATGCAGGCTAATAACCTAGATGAGGCAATATCAATAATCAACATAAACAAGTATGGAAATGGAGCTACCATATTTACCACATCTGGTGTAGCTGCTAGGAAGTTCCAGAACGAGGTCGAGGCTGTTCTGGTTGGAATCAATGTTACTGCTCCTGTTCGTTTGCCATTTTCTTCCTTCAGTGGTTCGAAGGCAGCTTTTGCTGGTGATATAAACTTTTGTGGAAAGGCAGCAGTTCAGTTTTATACCCAAATCAAAACAGTGGCACAGCAATGGAAGGATTCCCCAAGTCTTGGTGTTTTGCCTTCTGCAAGTCCAGCTGACACGGGTAGAACCAATCGACATGTCTCATCATCAGTGCCTCCACCCCACAGACACTCGCCCAGAGAAATAGCATCACAAATCATGCCTGTAGAATCTGAAAGTGATTCACCAGCACAAGGGGTGCAAATTTCCATTCCAGACACTACTACAGACATCACAACTGTGTCATCCGCTTCTCCAACAACTGAAAAGGGTCTTGGAAAACCAGCCATGTCTCTGGTTCTGCCTACATCGTCCAATAGAGACATGGAAGATCAGGACATGTCACTGGCATTATCTCCTACATCTCAGAGAGACATGATGACGAGCCAGGGAGTGTCAGTAGCCACCCCCCAGACATCAGAGAGGTTGTACTTTTCTAAATCATCACACTGGAATGAAGGCTCTTCTGCAACGTCTCGAAGGAGGGAAAATATCTCATCCGCTTCTGATGGGAGTCATATACCCACTACATCTCACAGGAATGATAATACATCATCAACATCTCAGCGAACCGATGCCGCCACAGCTATGAAAGCAGAGAGGCCATACATGCCCTTATCACATAAAGTCGATAACATCATCGGTCCATCCCCCGGGATCGACGCTACTATCCCTTCTACTTCTGCAAGTGTTGTGTATGTCCTTGCAGCATCTCATTTAAATGAGAACCTTGGTCGAACATTTGAAAGACCTGAACCCATGTTTACAACTTCTGAGAGGATGTATATGCCTGCAGCATCTCAAAGGACTGATATTGGCTTAGGTCCTACTTCAGAGAGGATGCATATTTCTGCAACATCTCATAGAACTGAAAGAATTAGCGCGCCTTCTCAGCTTGGCGATGCTTTGTCTCCTATGGTACATAATATGCCGGCGAATTCAGAGAGGTTATATATACCAGCTACATCTCAAAGTATGTATAATCGAGACTCAATAATTTCAATAGATGAATTTTCCAGCCAATCTGTGGCTCTGACTTTACCAAGACCTCAGAGGATGTAA	2703	0.4391	MLFVCFLRLLIGFLLYTFHFSGFFXLQSTPRHLYNLKAKIRQGNLSEKTFKSWNPNKYFPVETDHTPSGGSSMQNYQPLKVPNFIGGRYIDSESCGILDVTNPATQEVVSQVPLTTYEEFKAAVKAAKQAFPAWKNTPSTTRHRIMFKFRELIYRDIDKLAMNITIEQGKTLKGAQRDVLHGLEVVEHACGMSNLQMGEFVPNAYDGIDTYCIREPLGVCAGICPVNFPAMIPLWMFPIAVACGNTFILKPCEKNPGASMILAALAMEAGLPDGVLNIVHGTHEILNYIRDDEDIKAVSFVGPVVAGMHIYARAAARGKRVQSNTRSKNHAVVMPDASMGATLDALIAASFGAAGEGCMTLSTAIFVGGSLPWEQELVQRAKVLKVNAGTEPSADLGPVISKEAKDQICRLVQSSVENGARLLLDGRHIVVPGYENGNFVAPTILCDITIDMECYKEEVFGPVLLCMQANNLDEAISIININKYGNGATIFTTSGVAARKFQNEVEAVLVGINVTAPVRLPFSSFSGSKAAFAGDINFCGKAAVQFYTQIKTVAQQWKDSPSLGVLPSASPADTGRTNRHVSSSVPPPHRHSPREIASQIMPVESESDSPAQGVQISIPDTTTDITTVSSASPTTEKGLGKPAMSLVLPTSSNRDMEDQDMSLALSPTSQRDMMTSQGVSVATPQTSERLYFSKSSHWNEGSSATSRRRENISSASDGSHIPTTSHRNDNTSSTSQRTDAATAMKAERPYMPLSHKVDNIIGPSPGIDATIPSTSASVVYVLAASHLNENLGRTFERPEPMFTTSERMYMPAASQRTDIGLGPTSERMHISATSHRTERISAPSQLGDALSPMVHNMPANSERLYIPATSQSMYNRDSIISIDEFSSQSVALTLPRPQRM	900

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele50g1031	900	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 1	100	532	IPR016162	GO:0016491
	Lele50g1031	900	SUPERFAMILY	ALDH-like	74	559	IPR016161	GO:0016491
	Lele50g1031	900	FunFam	Methylmalonate-semialdehyde dehydrogenase (Acylating)	326	526	-	-
	Lele50g1031	900	MobiDBLite	consensus disorder prediction	571	585	-	-
	Lele50g1031	900	CDD	ALDH_F6_MMSDH	81	557	IPR010061	GO:0004491
	Lele50g1031	900	FunFam	Methylmalonate-semialdehyde dehydrogenase [acylating]	85	332	-	-
	Lele50g1031	900	PANTHER	MALONATE-SEMIALDEHYDE DEHYDROGENASE	26	641	IPR010061	GO:0004491
	Lele50g1031	900	Gene3D	Aldehyde Dehydrogenase; Chain A, domain 2	326	526	IPR016163	GO:0016620
	Lele50g1031	900	MobiDBLite	consensus disorder prediction	561	599	-	-
	Lele50g1031	900	MobiDBLite	consensus disorder prediction	624	743	-	-
	Lele50g1031	900	MobiDBLite	consensus disorder prediction	646	741	-	-
	Lele50g1031	900	Pfam	Aldehyde dehydrogenase family	90	553	IPR015590	GO:0016491
	Lele50g1031	900	TIGRFAM	MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating)	82	557	IPR010061	GO:0004491

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele50g1031	Lele-ChrLele50	6603549	6612893	Dispersed/Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele50g1031	72	544	Aldehyde Dehydrogenase Gene Family	AT2G14170	71.036	0.0	701