Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1024 ATGGCAACACAAGAAGTTGTGTCTAATGTTCCTTTAACTACTTATGAAGAGTTCAAAGCTGCAGTTAAAGCAGCCAAGCAAGCTTTTCCGGCATGGAAAAACACTCCAAGCACCACTCGCCATCATATCATGTTTAAGTTCCGAGAGCTTATCTATAGGGCCATTGATAAGCTTGCCATGAATATCACCATAGAGCAGGGCAAGTCTTTAAAAGGCGCTCAAAGAGATGTGCTCCATGGTTTAGAGGTGGTGGAACATGCTTGTGGGATGTCCAATCTTCAAATGGGGGAATTTGTCCCTAATGCTTATGATGGAATTGATACATACTGCATAAGAGAACCCCTTGGAGTTTGTGCTGGAATATGCCCTGTCAACTTTCCAGCAATGATACCCTTGTGGAGCAAGTGGAGTCTGTTGAAGGAAGGAATTATTGTATCATCTTCTGATCTTATGGTTTTCTTCTCTTCCAAGCTGGAAACTGGAAGGGCTTCAATGATACTTGCAGCACTAGCAATGGAAGCGGGTTTGCCAGATGGTGTATTAAACATTGTTCATGGTACCCATGAGATTTTGAATTACACATGTGATGATGAGGATATAAAAGCTGTATCATTTGTGGGTCCAGTTGTGGTAGGTTTGGCTGGAATGCACATATATGCCAGGGCTGCTACTAGAGGGAAACGTGTCCAGGCAGCAAAAATCACGCGGTTGTCACCAGATGCTAGCATGGGTGCTACTCTAGATGCTCTTATTGCTGCTTCCTTTGGTGCTGCGGGAGAGGGATGCATGACCCTAAGCACAGCTATTTTTGTTGGAGGATCATTGCCATGGGAACAAGAACTTGAGCAACGTGCCAAAGTACTTAAAGTGAATGCAGGAACAGAGCCTAGTGCAGATCTTGGTCCAGTTATTAGCAAAGAGGTGCTGATGTTATCTTTTTTTGGGTACACTTTGATACAGGCAAAGGATCAGATATGTAGATTAGTTCAGAGCAGTGTTGAAAATGGTGCGAGGCTACTGCTTGATGGAAGACATATTGTGGTACCAGGATATGAGAATGGGAACTTTGTTGCCCCTACAATTTTATGCGATATTACAATCGACATGGAGTGCTACAAGGAAGAAGTTTCTGGGCCAGTTGTCTGCATTCAGGCTAATAACCTAGATGAGGCAATATCAATAATCAACATAAACAAGTATGGAAATGGAGCTACCATATTTACCACATCTGGTGTGGCTGCTAGGAAGTTCCAGAATGAGGTCGAGGCTGTTCTGGTTGGAATCAATGTTACTGCTCCTGTTCGTTTGCCATTTTCTTCCTTCAGTGTTTCGAAGGCATCTTTTGCTGGTGATATAAACTTTTGTGGTGAAGCTCTCGCCCTCCCTTTCCTTGAGTTTTGCATTTCTTGTGGCTATTTCAGTCTTTTCTCACCCTTCCCAAAATTGAATATTGTGCTCAATTCAGGAAAGGCAGCAGTTCAGTTTTATACCCAAATCAAAACAGGGGCACAGCAATGGAAGGATTCCCCAAGTCTTGGTGTTTTGCCTTCTGCAAGTCCAGTTGACACGGGTAGAACCAATCGACATGTCTCATCATCAGTGCCTCCACCCCACAGACACTCGCCCAGAGAAATAGCATCACAAATCATGCCTGTAGATGAAAGTGATTCACCAGCGCAAGGGGTGCAAATTTCCATTCCAGACACTACTACCGACATCACAACTGTGTCATCCGCTTCTCCAACAACTGACAAGGGTCTTGGAAAACCAGCCATGTCTCTGGTTCTGCCTTCATCGTCCAATAGAGACATGGAAGATCAGGACATGTCACTGGCATTATCTCCTACATCTCAGAGAGACATGATGACTAGCCAGGGAGTATCAGTAGCCACACCCCAGACATCAGAGAGGTTGTACTTTTCTAAATCATCACACTGGAATGAAGGCTCTTCTGCAACGTATTAA 1965 0.4412 MATQEVVSNVPLTTYEEFKAAVKAAKQAFPAWKNTPSTTRHHIMFKFRELIYRAIDKLAMNITIEQGKSLKGAQRDVLHGLEVVEHACGMSNLQMGEFVPNAYDGIDTYCIREPLGVCAGICPVNFPAMIPLWSKWSLLKEGIIVSSSDLMVFFSSKLETGRASMILAALAMEAGLPDGVLNIVHGTHEILNYTCDDEDIKAVSFVGPVVVGLAGMHIYARAATRGKRVQAAKITRLSPDASMGATLDALIAASFGAAGEGCMTLSTAIFVGGSLPWEQELEQRAKVLKVNAGTEPSADLGPVISKEVLMLSFFGYTLIQAKDQICRLVQSSVENGARLLLDGRHIVVPGYENGNFVAPTILCDITIDMECYKEEVSGPVVCIQANNLDEAISIININKYGNGATIFTTSGVAARKFQNEVEAVLVGINVTAPVRLPFSSFSVSKASFAGDINFCGEALALPFLEFCISCGYFSLFSPFPKLNIVLNSGKAAVQFYTQIKTGAQQWKDSPSLGVLPSASPVDTGRTNRHVSSSVPPPHRHSPREIASQIMPVDESDSPAQGVQISIPDTTTDITTVSSASPTTDKGLGKPAMSLVLPSSSNRDMEDQDMSLALSPTSQRDMMTSQGVSVATPQTSERLYFSKSSHWNEGSSATY 654
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1024 654 MobiDBLite consensus disorder prediction 594 654 - -
Lele50g1024 654 PANTHER MALONATE-SEMIALDEHYDE DEHYDROGENASE 2 458 IPR010061 GO:0004491
Lele50g1024 654 MobiDBLite consensus disorder prediction 517 543 - -
Lele50g1024 654 FunFam Methylmalonate-semialdehyde dehydrogenase (Acylating) 231 442 - -
Lele50g1024 654 Pfam Aldehyde dehydrogenase family 2 451 IPR015590 GO:0016491
Lele50g1024 654 TIGRFAM MMSDH: methylmalonate-semialdehyde dehydrogenase (acylating) 2 457 IPR010061 GO:0004491
Lele50g1024 654 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 234 442 IPR016163 GO:0016620
Lele50g1024 654 MobiDBLite consensus disorder prediction 520 534 - -
Lele50g1024 654 SUPERFAMILY ALDH-like 2 451 IPR016161 GO:0016491
Lele50g1024 654 MobiDBLite consensus disorder prediction 570 654 - -
Lele50g1024 654 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 2 450 IPR016162 GO:0016491
Lele50g1024 654 MobiDBLite consensus disorder prediction 570 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1024 Lele-ChrLele50 6531211 6538154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1024 2 459 Aldehyde Dehydrogenase Gene Family AT2G14170 63.715 0.0 564