Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1019 ATGCTCAAGAACGAATGGGGCATTTCCGTCTATCCATTTGTACCTGGGCACGAGATTTCTGGTGTTGTGACAGAAGTAGGAAACAAAGTAGAGAAACTCAAAGTTGGAGACAAGGTTGGTGTGGGATACATGGTTGGCTCCTGCCGATCATGTGAAAGCTATTCCGACGACCTTGAGAACCAGTGCTCTAAACATATACTTACTTCTGGTGCCAAGTATGTAGATGGCACTATCACATATGGAGGCTACTCTGATTTCATGGTTGCAGATGAGCATTTTGTGGTTAGAATTCCAGATGCATTGCCTCTTGATGCTGCAGCTCCTCTGCTCTGTGCTGGGATCACAGTGTATAGCCCCTTGAGATACTTTGGTCTCGACAAGCCAGGCCTTCATTTGGGTGTGGTTGGTCTTGGTGGCCTTGGCCATATGGCTGTTAAGTTTGCCAAAGCCTTTGGGGCTAAGGTCACTGTCATAAGTACATCTCTTGACAAAAAGAAAGAAGCCGTTGAACATCTTGGAGCTGACTCCTTTCTTGTTAGCCGGCAGGAAGATCAGATGCAGGCTGCAATGGGGAGTTTGGATGGGATCATTGACACAGTCTCAGCGCCGCATTCTCTGAGGCCTTTGATTGGTTTGTTGAAGCCAAACCGAAAACTTGTATTGGTGGGTGCACCAGAAAAGCCTCTAGAGCTCCCAGTGTTCCCTTTAAATGCGGGGAGAAAGATGGTGGCTGGAAGCTATATTGGAGGGTTGAAGGAGACCCAAGAAATGGTTGATTTTGCTGCAAAGCACAATGTGAAACCAGACATAGAAGTTATTCCAGTGGATTACGTGAACACCGCAATGGAGCGTCTCCATAAAGCTGATGTCAAGTATCGTTTTGTGATTGACATCGCCAACACATTGAACCCAACAACAGCCTCTTAG 927 0.4671 MLKNEWGISVYPFVPGHEISGVVTEVGNKVEKLKVGDKVGVGYMVGSCRSCESYSDDLENQCSKHILTSGAKYVDGTITYGGYSDFMVADEHFVVRIPDALPLDAAAPLLCAGITVYSPLRYFGLDKPGLHLGVVGLGGLGHMAVKFAKAFGAKVTVISTSLDKKKEAVEHLGADSFLVSRQEDQMQAAMGSLDGIIDTVSAPHSLRPLIGLLKPNRKLVLVGAPEKPLELPVFPLNAGRKMVAGSYIGGLKETQEMVDFAAKHNVKPDIEVIPVDYVNTAMERLHKADVKYRFVIDIANTLNPTTAS 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1019 308 Pfam Zinc-binding dehydrogenase 139 262 IPR013149 -
Lele50g1019 308 Gene3D - 1 298 - -
Lele50g1019 308 FunFam Cinnamyl alcohol dehydrogenase 112 268 - -
Lele50g1019 308 PANTHER ALDEHYDE REDUCTASE 1 301 - -
Lele50g1019 308 CDD CAD1 1 297 - -
Lele50g1019 308 FunFam Putative cinnamyl alcohol dehydrogenase 6 269 298 - -
Lele50g1019 308 SMART PKS_ER_names_mod 3 296 IPR020843 GO:0016491
Lele50g1019 308 SUPERFAMILY GroES-like 2 129 IPR011032 -
Lele50g1019 308 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 101 267 IPR036291 -
Lele50g1019 308 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 16 30 IPR002328 GO:0008270|GO:0016491
Lele50g1019 308 Gene3D - 112 268 - -
Lele50g1019 308 Pfam Alcohol dehydrogenase GroES-like domain 9 96 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1019 Lele-ChrLele50 6497763 6499415 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1019 1 305 Monolignol Biosynthesis Gene Families AT4G37990 71.148 1.06e-141 402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1019 50 6497763 6499415 Lele51g0974 51 6153347 6154625 hybridization
Lele50g1019 50 6497763 6499415 Lele52g0993 52 6532471 6534956 hybridization