Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1018 ATGGCACTACAACAATCTGAGTTTCAGCATCCGAGGAAGGCCTTTGGATGGGCGGCTAGGGACGCATCTGGGCTTCTCTCCCCTTTCAACTTCTCTCGCAGGGAAACCGGAGAGAAAGATGTGAGATTCAAAGTTATGTATTGTGGAATATGCCACTCCGACCTCCACATGCTCAAGAATGAATGGGGCAATTCCGTCTATCCCCTTGTACCTGGGCACGAGATTGCTGGTGTAGTGACAGAAGTGGGAAGCAAGGTAGAAAATTTCAAAGTTGGAGACAAGGTTGGTGTGGGATGCTTGGTTGGCTCCTGCCGATCATGTCAAAGCTGTTCCGACGACTTTGAGAATCAGTGCTCAAACCATATTCTCACATATGGTGCCAAGTACGTGGATGGCACTATCACATATGGAGGTTACTCTGACTTTATGGTTGCCGACGAACATTTTGTGGTAAGAATTCCAGAAGCTTTGCCTCTTGATGCTGCAGCTCCTCTGTTCTGTGCCGGAATCACAGTGTATAGCCCTTTGAGGTACTTTAGTCTGGACAAGCCAGGCCTTCATGTGGGCGTGGTTGGTCTTGGTGGACTTGGCCATATGGCTGTCAAGTTTGCAAAAGCCTTTGGGGCTAAGGTCACTGTCATCAGCACATCTCCTAACAAAAAGAAAGAAGCCATTCAACATCTTGGAGCTGACTCCTTTATTGTCAGCCGCGAGCAACATGAGATGCAGGCTGCAATGGGAACTTTGGATGGGATAATTGACACAGTTTCTGCACAACATCCACTGGTGCCTTTGATTGGTCTGTTGAAGTCTAATGGAAAACTTGTGTTGGTGGGTGCACCTGAGAAGCCTCTTGAACTGCCAGTGTTCCCTTTACTAGCGGGGAGAAAGATGGTGGCTGGGAGTGGCATCGGAGGGTTGAAGGAGACACAAGAAATGATGGATTTTGCTGCAGAGCACAATGTGAAACCAGACATAGAAGTGATTCCAATGGATTACGCGAATACTGCAATGGAGCGTCTTCTTAAAGCTGATGTCAAGTATCGTTTTGTCATTGACATTGCCAACACGTTGAAGCCAACAACAACCCTTAGATTTCCATGA 1104 0.4746 MALQQSEFQHPRKAFGWAARDASGLLSPFNFSRRETGEKDVRFKVMYCGICHSDLHMLKNEWGNSVYPLVPGHEIAGVVTEVGSKVENFKVGDKVGVGCLVGSCRSCQSCSDDFENQCSNHILTYGAKYVDGTITYGGYSDFMVADEHFVVRIPEALPLDAAAPLFCAGITVYSPLRYFSLDKPGLHVGVVGLGGLGHMAVKFAKAFGAKVTVISTSPNKKKEAIQHLGADSFIVSREQHEMQAAMGTLDGIIDTVSAQHPLVPLIGLLKSNGKLVLVGAPEKPLELPVFPLLAGRKMVAGSGIGGLKETQEMMDFAAEHNVKPDIEVIPMDYANTAMERLLKADVKYRFVIDIANTLKPTTTLRFP 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1018 367 PANTHER ALDEHYDE REDUCTASE 7 357 - -
Lele50g1018 367 FunFam Cinnamyl alcohol dehydrogenase 168 324 - -
Lele50g1018 367 SMART PKS_ER_names_mod 24 352 IPR020843 GO:0016491
Lele50g1018 367 Pfam Alcohol dehydrogenase GroES-like domain 39 152 IPR013154 -
Lele50g1018 367 Gene3D - 168 324 - -
Lele50g1018 367 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 157 323 IPR036291 -
Lele50g1018 367 Pfam Zinc-binding dehydrogenase 195 318 IPR013149 -
Lele50g1018 367 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 72 86 IPR002328 GO:0008270|GO:0016491
Lele50g1018 367 SUPERFAMILY GroES-like 21 185 IPR011032 -
Lele50g1018 367 FunFam Putative cinnamyl alcohol dehydrogenase 6 325 354 - -
Lele50g1018 367 Gene3D - 17 354 - -
Lele50g1018 367 CDD CAD1 15 353 - -
Lele50g1018 367 FunFam Uncharacterized protein 17 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1018 Lele-ChrLele50 6492514 6494160 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1018 12 364 Monolignol Biosynthesis Gene Families AT4G37990 71.671 8.95e-176 491
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1018 50 6492514 6494160 Lele51g0973 51 6146906 6149278 hybridization
Lele50g1018 50 6492514 6494160 Lele52g0992 52 6527354 6528974 hybridization