Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1017 ATGGCGGTGCAACCTAAGGCTGAGCATCCCTGCAAGGCTTTTGGATGGGCCGCCACAGGTCCCTCCGGTCTTCTTTCCCCTTTCAACTTCTCCAGAAGGGAAACAGGGGAGAAAGATGTGGCATTCAAAGTGTTGTACTGTGGAATATGCCATTCGGATCTCCACATGTTGAAGAATGAATGGGGCGTTTCCACCTATCCTCTTGTTCCTGGGCACGAGATTGTTGGGATAGTAACAGAAGTGGGAAGCAAGGTAGAGAAATTCAAAGTTGGAGACAAGGTGGGAGTAGGATGCATGGTTGGATCCTGCAAATCCTGTCAAAGCTGTTCAGACAATCTTGAGAACTATTGCCCAAAAAGTATCCTCACGTACGGTTCTAAATACGTGGATGGATCTCCCACTTATGGAGGCTATTCAAACCAGATGGTTGCAGAAGAACACTTTGTGATTCGAATCCCAGATGCTTTACCTCTTGATTCTGCAGCTCCTCTGCTTTGTGCTGGGATCACAGTTTATAGCCCTTTGAGATACTTTGGTCTTGATAAGCCAGGCCTTCATGTGGGTGTGGTTGGTCTTGGTGGACTTGGTCATTTAGCTGTCAAATTTGGTAAAGCTTTTGGGGCTAAGGTTACAGTAATCAGTACATCTCCTAACAAAAAGAAGGAAGCTATTGAACGTCTTGGAGCTGACTCATTTGTGGCTGTATTAGGCACTTTTGATGGAATCATTGATACAGTTTCTGCAACCCATCCTCTGTTGCCTTTGCTTGGTTTGTTGAAGTCTCATGGTAAACTTATAATGCTTGGTGCACCACAGAAGCCTTTGGAGTTGCCAGCCTTCCTTTTACTCATGGGGAGGAAGACGATAGCTGGAAGTGCCATTGGAGGGATCAAGGAGACACAAGAAATGATCGATTTTGCTTCTAAACACAATGTGAAACCTGACATTGAGGTTATTTCCATGGATTATGTGAACACTGCAATGGAGCGTCTTCTCAAAGCAGATGTCAAATATCGATTTGTTATCGACATTGGCAACACCTTGAAGCCAAGCCCTTAA 1059 0.4504 MAVQPKAEHPCKAFGWAATGPSGLLSPFNFSRRETGEKDVAFKVLYCGICHSDLHMLKNEWGVSTYPLVPGHEIVGIVTEVGSKVEKFKVGDKVGVGCMVGSCKSCQSCSDNLENYCPKSILTYGSKYVDGSPTYGGYSNQMVAEEHFVIRIPDALPLDSAAPLLCAGITVYSPLRYFGLDKPGLHVGVVGLGGLGHLAVKFGKAFGAKVTVISTSPNKKKEAIERLGADSFVAVLGTFDGIIDTVSATHPLLPLLGLLKSHGKLIMLGAPQKPLELPAFLLLMGRKTIAGSAIGGIKETQEMIDFASKHNVKPDIEVISMDYVNTAMERLLKADVKYRFVIDIGNTLKPSP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1017 352 CDD CAD1 14 343 - -
Lele50g1017 352 Pfam Alcohol dehydrogenase GroES-like domain 38 151 IPR013154 -
Lele50g1017 352 FunFam Cinnamyl alcohol dehydrogenase 167 314 - -
Lele50g1017 352 PANTHER ALDEHYDE REDUCTASE 6 347 - -
Lele50g1017 352 Pfam Zinc-binding dehydrogenase 194 308 IPR013149 -
Lele50g1017 352 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270|GO:0016491
Lele50g1017 352 FunFam Putative cinnamyl alcohol dehydrogenase 6 315 344 - -
Lele50g1017 352 Gene3D - 167 314 - -
Lele50g1017 352 SUPERFAMILY GroES-like 18 184 IPR011032 -
Lele50g1017 352 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 313 IPR036291 -
Lele50g1017 352 SMART PKS_ER_names_mod 23 342 IPR020843 GO:0016491
Lele50g1017 352 Gene3D - 16 344 - -
Lele50g1017 352 FunFam Uncharacterized protein 16 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1017 Lele-ChrLele50 6487648 6490207 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1017 12 352 Monolignol Biosynthesis Gene Families AT4G37990 72.571 3.30e-173 484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g1017 50 6487648 6490207 Lele52g0991 52 6522329 6524605 hybridization