Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g1009 ATGAAATCAGTGATTGAGAGATATAACACAACCAAGGAGGAAAACCAGCAACTGATGAATCCAAATTCGGAAGCCAAGTTTTGGCAAAGGGAGGCAGAAGTATTAAGGCAACAACTACAGAATCTACAAGAAAACCATCGGCAAGTGATGGGAGAACAGCTTTATGGTTTAAGTGTGAAAAACCTACAAGATCTCGAGAACCAGCTGGAAATGAGTCTCAGATGCATTCGCATGAAAAAGGAACAAATTCTAACAGAAGAAATCCGAGAACTGAATCAAAAGGGAAACATTATACATCAGGAAAATCTGGAACTCTATAAGAAGGTTTATGGCACATCGGAAATGGCGGCTACGAGCAGAGATGCATTCAATCCATACGGATTTCATACGGGCGAGGATCCACAGGAAATGATCCAACTGCAGCTAAGCCAGCCAGAGCAAGATACATACGAGACATCGGGCAGCGCCTCGAAATAA 477 0.4256 MKSVIERYNTTKEENQQLMNPNSEAKFWQREAEVLRQQLQNLQENHRQVMGEQLYGLSVKNLQDLENQLEMSLRCIRMKKEQILTEEIRELNQKGNIIHQENLELYKKVYGTSEMAATSRDAFNPYGFHTGEDPQEMIQLQLSQPEQDTYETSGSASK 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g1009 158 ProSiteProfiles K-box domain profile. 25 115 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele50g1009 158 Pfam K-box region 22 109 IPR002487 GO:0003700|GO:0005634|GO:0006355
Lele50g1009 158 Coils Coil 25 52 - -
Lele50g1009 158 Coils Coil 62 82 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g1009 Lele-ChrLele50 6432291 6434024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g1009 1 156 MADS-box Gene Family AT2G22630 54.598 5.67e-54 168