Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0981 ATGACAGACTATAGGTCGCCGCCGACGATGAATCTTTGGACCGATGACAACTCCTCCGTTATGGAAGCTTTCATGAGCTCCGATCTATCCGTACTCTGGCCTCCTCCGCCTCAGCCCCAATCCTCTGCTTCCACTACTACTCCGGGACCCGACCCCTCCAAGCCTCTCTCTCAGTCTCAGCCTTCCGCTGCTCTCTTTAATCAAGAAACCCTTCAGCAGCGCCTTCAGGCCTTGATTGAAGGTGCCAGAGAGAGCTGGACTTACGCTATCTTTTGGCAATCGTCGTACGACTACTCCGGCGCGTCCTTGCTCGGCTGGGGCGATGGGTACTACAAAGGTGAGGAAGATAAAGGAAAAGGGAAGGCCAAAGCGCTGTCGTCCGCGGCGGAGCAGGAACACCGGAAGAAGGTTCTCCGCGAGCTTAATTCCCTCATTTCTGGATCCTCTTCCCCCAAAGACGACGCCGTGGACGAAGAAGTCACCGATACAGAGTGGTTCTTCCTCGTTTCCATGACTCAATCGTTTGTCAACGGCGACGGGTTACCGGGTCAGGCCTTCTATAATTCTACCCCTGTCTGGATCACCGGTGGGGAGAGGTTGGCGGCTTCGACTTGCGAAAGAGCGCGACAGGGTCAGGTGTTCGGGCTTCAGACTTTGGTTTGTATACCGTCGGCGAATGGGGTGGTGGAGCTGGGATCCACTGAATTGATTTTCCAAAACTCGGATCTGATGAACAAGGTGAAAGTATGGTTCAATTTCAACAATCCAGAAATTGGTTCGTGGCCTCTCATGGCTCCTAATGCCGATCAAGGTGAGAACGATCCTTCCTCGCTTTGGCTTAACGATCCGTCTTCTGGAATTGAAGTCAGAGATTCGACCAACACCACTGTTCCGGCTTCGGTTCCGAGCTCGAATACCAGTCACAACATCCAGACAGTTGCTAAGCCAATGCAGTTTGAAACCCCAGTTTCGAGTACTTTAACTGAAGCACCAAGTGTTGTTCATGTCCCGAATACTCAATACGGTAACCAGCAACGGCAACCGTCACAGCAGTCGCAGAATCAGGGTTTCTTCTCGAAGGAGTTGAACTTTTCAGAATATGGGTTCGACGGGAACGGCCTAAAGAACGGGAATATGCATTCCTTGAAGCCGGAATCAGGTGAAATTTTAAACTTTGGGGAGAGCAAGAGGAACTCTTATGGTGGAAATGGGAATTTCTTTACAGGACAGAGTCCATTCATCGGAGAAGACAACAAAAAGAGGTCACCTACTTCCAAGGGTAGTAACGACGAAGGGATGCTCTCGTTCACTTCCGGCGTGATTTTGCCGCCTTCTAATATGAAGTCTAGCGGCGGCGATTCCGATCACTCGGATCTTGAAGCGTCGGTGGTGAAGGAAGCGGATAGTAGCAAAGTGGTAGAACTAGAAAAGCGACCTCGAAAAAGAGGGCGAAAGCCGGCGAATGGCCGGGTGGAGCCTCTGAATCACGTTGAAGCAGAGAGACAGAGGAGAGAGAAGCTGAATCAGAGGTTCTACGCACTTCGTGCTGTGGTCCCAAACGTGTCAAAAATGGACAAAGCATCTCTCCTAGGCGACGCCATATCTTACATCAACGAGCTCAAGTCGAAGCTCCAGAATCAAGAATCAAACAACAATGATTTACAGAAGCAACTGGATTCAGTCAAGAAGGAACTCGAACTTGCCGCTATTAAAGATTCTCGCGCGCCCCCACCAGATAAAGAACAAAAAACCTCCAACAACCAAGCAAACGGCAAGCTAATAGATTTGGACATCGATGTGAAGATCATAGGTTGGGATGCAATGATCCGAATCCAATGTAGCAAGAGGAACCATCCAGCAGCAAGGTTGATGGCGGCTTTACAGGAACTAGACCTGGAAGTAAATCATGCGAGCGTGTCGGTAGTTAATGATCTGATGATCCAACAAGCGACAGTGAAAATGGGAAGTCGATTTTACACGCAGGAGCAGCTCCGGCTAGCACTTGTATCCAAGGTCGGAGATGTCCGATGA 2031 0.5017 MTDYRSPPTMNLWTDDNSSVMEAFMSSDLSVLWPPPPQPQSSASTTTPGPDPSKPLSQSQPSAALFNQETLQQRLQALIEGARESWTYAIFWQSSYDYSGASLLGWGDGYYKGEEDKGKGKAKALSSAAEQEHRKKVLRELNSLISGSSSPKDDAVDEEVTDTEWFFLVSMTQSFVNGDGLPGQAFYNSTPVWITGGERLAASTCERARQGQVFGLQTLVCIPSANGVVELGSTELIFQNSDLMNKVKVWFNFNNPEIGSWPLMAPNADQGENDPSSLWLNDPSSGIEVRDSTNTTVPASVPSSNTSHNIQTVAKPMQFETPVSSTLTEAPSVVHVPNTQYGNQQRQPSQQSQNQGFFSKELNFSEYGFDGNGLKNGNMHSLKPESGEILNFGESKRNSYGGNGNFFTGQSPFIGEDNKKRSPTSKGSNDEGMLSFTSGVILPPSNMKSSGGDSDHSDLEASVVKEADSSKVVELEKRPRKRGRKPANGRVEPLNHVEAERQRREKLNQRFYALRAVVPNVSKMDKASLLGDAISYINELKSKLQNQESNNNDLQKQLDSVKKELELAAIKDSRAPPPDKEQKTSNNQANGKLIDLDIDVKIIGWDAMIRIQCSKRNHPAARLMAALQELDLEVNHASVSVVNDLMIQQATVKMGSRFYTQEQLRLALVSKVGDVR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0981 676 MobiDBLite consensus disorder prediction 401 493 - -
Lele50g0981 676 MobiDBLite consensus disorder prediction 29 61 - -
Lele50g0981 676 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 71 251 IPR025610 -
Lele50g0981 676 MobiDBLite consensus disorder prediction 453 493 - -
Lele50g0981 676 Pfam Helix-loop-helix DNA-binding domain 495 540 IPR011598 GO:0046983
Lele50g0981 676 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 494 560 IPR036638 GO:0046983
Lele50g0981 676 MobiDBLite consensus disorder prediction 569 588 - -
Lele50g0981 676 MobiDBLite consensus disorder prediction 401 418 - -
Lele50g0981 676 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 491 540 IPR011598 GO:0046983
Lele50g0981 676 CDD bHLH_AtAIB_like 488 564 - -
Lele50g0981 676 MobiDBLite consensus disorder prediction 427 452 - -
Lele50g0981 676 MobiDBLite consensus disorder prediction 44 61 - -
Lele50g0981 676 FunFam Transcription factor bHLH13 484 558 - -
Lele50g0981 676 Gene3D - 493 568 IPR036638 GO:0046983
Lele50g0981 676 PANTHER MYC 44 671 IPR045084 GO:0003700|GO:0006355
Lele50g0981 676 Coils Coil 537 571 - -
Lele50g0981 676 SMART finulus 497 546 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0981 Lele-ChrLele50 6223857 6225887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0981 1 673 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G32640 56.277 0.0 663
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele50g0981 bHLH-MYC_N 1.4e-55 CL0161