Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0973 ATGAAATCGGCGTGCCTAATGTTTGGTAGTGGACTTTGTGCGGATAAGAACGACCCCTCTCCTTGCTCTTTTGTGTTCAGTCTCTCTCTTTTAACTCTCGTTCTTCCTTTAACGCCATCACCATTCTACCGCCTCCTTTTTTTCTCCATTAACCCCTTTTCCTTCGTCCTTCAAACTTCTCCCTTTCTCACGAATTCATTCGCTTCCTTCTTCATTCTCTCTCACATCCATCGAGTTCTCTCCTCTGTTTCTCGCCTACCAGTCATGGCCATCGAGACCCGCGACACCCCTGTCATGGAAATCAAGCCCAAGAACAGGAGAATCATGGGTGCTGGAGGTCCTGATGACGAGGACAACAGGTGGCCGCCATGGTTGAAGTCTCTGCTGAAAGAAAGCTTCTTTGTTCATTGCAAGGTGCACGGTGATTCTCCCAAGAGCGAATGCAATATGTATTGCTTGGATTGTATGGACGGCGCTCTCTGTTCACTCTGCCTCGCCTACCACAGAGACCATCGTGTTATACAGATAAGGAGGTCATCTTACCACGATGTGATTAGGGTCAATGAGATTCAGAAAGTTCTCGACATATCCGGCGTTCAGACCTACATTATCAACAGCGCAAGGGTGGTGTTCTTGAACGAGAGGCCTCAGCCTAGGCCCGGCAAGGGCGTCACCAACACTTGCGAAGTCTGTGATCGTAGCCTCCTCGATTCCTATCGATTCTGTTCTCTCGGTTGCAAGACTGTGGGGACATCGAGGGATTTCCAGAAGAAGAAAAGGTCGGCGGCGGCATTCGCATCTGAGTCAGAGGATTCATACAGCAGCAGCAGCAGCCACAGCCGGCACAAGAACAGTAAAGTTCATAGCTTTACGCCGTCGACACCACCGCCGACTTCGGTGAATTACAGAACGGCCAAGAGAAGAAAGGGAATACCTCACAGGGCCCCAATGGGAGGACTAATCATAGAATACTAG 975 0.4985 MKSACLMFGSGLCADKNDPSPCSFVFSLSLLTLVLPLTPSPFYRLLFFSINPFSFVLQTSPFLTNSFASFFILSHIHRVLSSVSRLPVMAIETRDTPVMEIKPKNRRIMGAGGPDDEDNRWPPWLKSLLKESFFVHCKVHGDSPKSECNMYCLDCMDGALCSLCLAYHRDHRVIQIRRSSYHDVIRVNEIQKVLDISGVQTYIINSARVVFLNERPQPRPGKGVTNTCEVCDRSLLDSYRFCSLGCKTVGTSRDFQKKKRSAAAFASESEDSYSSSSSHSRHKNSKVHSFTPSTPPPTSVNYRTAKRRKGIPHRAPMGGLIIEY 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0973 324 Pfam PLATZ transcription factor 177 247 IPR006734 -
Lele50g0973 324 MobiDBLite consensus disorder prediction 287 301 - -
Lele50g0973 324 CDD Bbox2 136 176 - -
Lele50g0973 324 MobiDBLite consensus disorder prediction 266 318 - -
Lele50g0973 324 PANTHER PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN 115 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0973 Lele-ChrLele50 6156621 6158549 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF PLATZ Lele50g0973 PLATZ 1.7e-29 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0973 50 6156621 6158549 Lele50g0973 50 6156621 6158549 ECH
Lele50g0973 50 6156621 6158549 Lele51g0933 51 5821827 5823267 hybridization
Lele50g0973 50 6156621 6158549 Lele52g0949 52 6181924 6183396 hybridization