Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0968 ATGAAGCAGTCATATCCTGCAAGACCCAACACAGATTTGAATGCGAGGAGTAGCTATTGCACAGCTCGTTTCGTTTTCTCTCTGGCTCGGTCACTTGAAGAAGGGATGATGGCTCTGCTTGAGACTCTTTCTTCTAACGAGCTTTACAACTTCATTATCCATGACACTATCTCTGCAACCTCATTTGATTCCTCCTCAGAAAACAGAGTAGTGAACCATCATCCACTACTGGAACAACATGACCCTGCTCCTTCTTCTTCTTCAAGGAAACGCCATTCTGATGAGCTTGAGCTTCATCAGGTGCCTGTTGTTGTGCAAGGGAGGAAGAAGAGGAGAAGGAAGCCAAGAGTTTGTAAGAACAAAGAAGAAGCAGAGACTCAGAGAATGACACACATTGCAGTTGAAAGAAACCGCCGCAAGCAGATGAATGAGCATCTCGCCGTCCTCCGTTCACTCATGCCTGAATCCTACGTCCAAAGGGGTGACCATGCCTCTATAGTGGGTGGTGCTATAGAATTTGTGAAGGAGCTTGAGCATCTTTTGCAATCACTTGAAGCTAAGAAGTTGCAGATTCTGCAACAAGAAGTAGCACAAACTAATAATGAAGAATCTTCTTCTTCTTCTCCATCTTCCATTTTCACTCTCACGAGTCCCCATTTTGCACAATTCTTTGCGTATCCTCAGTACAAATGGTCTCAGACTCCAACCAAATATCCTTCAAAAACTAAGGCAGCCATAGCAGATATTGAGGTTACTTTGATAGAAACACATGCAAACCTCAGAATTCTGTCAAGGAGAAGCCCCAGGCAATTGTCAAAGCTGGTCTCTGGTTTTCAAACTCTCTTCCTCACCATCCTTCATCTTAATGTCACCACCATCGACCCTTTGGTTCTTTATTCTATCAGTGCCAAGGTTGAAGAAGGATGCCACCTTGGTTCAGCGGAGGACATAGCGACAGCAGTTCATCACTTGCTGAGAAGAATTGAGGAAGAAGATGCTTCACTTTGCTGTTGA 1014 0.4438 MKQSYPARPNTDLNARSSYCTARFVFSLARSLEEGMMALLETLSSNELYNFIIHDTISATSFDSSSENRVVNHHPLLEQHDPAPSSSSRKRHSDELELHQVPVVVQGRKKRRRKPRVCKNKEEAETQRMTHIAVERNRRKQMNEHLAVLRSLMPESYVQRGDHASIVGGAIEFVKELEHLLQSLEAKKLQILQQEVAQTNNEESSSSSPSSIFTLTSPHFAQFFAYPQYKWSQTPTKYPSKTKAAIADIEVTLIETHANLRILSRRSPRQLSKLVSGFQTLFLTILHLNVTTIDPLVLYSISAKVEEGCHLGSAEDIATAVHHLLRRIEEEDASLCC 337
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0968 337 MobiDBLite consensus disorder prediction 76 97 - -
Lele50g0968 337 SMART finulus 132 183 IPR011598 GO:0046983
Lele50g0968 337 Pfam Helix-loop-helix DNA-binding domain 127 178 IPR011598 GO:0046983
Lele50g0968 337 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 126 177 IPR011598 GO:0046983
Lele50g0968 337 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 126 194 IPR036638 GO:0046983
Lele50g0968 337 Coils Coil 174 194 - -
Lele50g0968 337 CDD bHLH_AtFAMA_like 129 188 - -
Lele50g0968 337 PANTHER MAX DIMERIZATION, MAD 63 332 - -
Lele50g0968 337 Gene3D - 118 200 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0968 Lele-ChrLele50 6126586 6128361 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0968 118 305 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 58.115 1.29e-62 200
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele50g0968 HLH 2e-10 No_clan