Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0956 ATGAAAGGCTATGGTGGCAACTTGAGCACAGCATATCTGAAATTAAACATGCTGGCTGGGGAAGCTGTCAGTAACATGCGTACTGTTGCTGCATTTTGTTCTGAAGAAAAGGTCCTAAAACTTTATGCTAATGAGCTTGTCGAGCCTTCTAAGCTTTCATTTAAACGGGGACAAATTTCTCGCTTATTCTGTGGCATTTCACAGTTCTTCATTTTCTCTTATGGCCTTGCCTTGTGGTATGGTTCCGTTTTGATGGAAAAGGAGCTGGCTAGCTTCAAATCCATAATGAAGTCATTTATGGTTCTAATTGTAACTGCATTGGGCATGGGAGAGACGTTGGCACTGGCCCCAGACCTTTTGAAAGGGAACCAAATGGTTGCTTCAGTTTTTTAG 393 0.4224 MKGYGGNLSTAYLKLNMLAGEAVSNMRTVAAFCSEEKVLKLYANELVEPSKLSFKRGQISRLFCGISQFFIFSYGLALWYGSVLMEKELASFKSIMKSFMVLIVTALGMGETLALAPDLLKGNQMVASVF 130
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0956 130 Pfam ABC transporter transmembrane region 9 107 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele50g0956 130 Gene3D ABC transporter type 1, transmembrane domain 1 130 IPR036640 GO:0005524|GO:0016020
Lele50g0956 130 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 121 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Lele50g0956 130 PANTHER ATP-BINDING CASSETTE SUB-FAMILY B 10 130 IPR039421 -
Lele50g0956 130 SUPERFAMILY ABC transporter transmembrane region 7 129 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0956 Lele-ChrLele50 6033301 6033790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0956 1 130 Calmodulin-binding Proteins AT2G36910 47.328 1.27e-33 121