Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0951 ATGATTTTAGTAAAATATAAATTTAATTTAGTAATTGTTTTGCTAACTTAGGGCTCAATGGCAATAGAAGCTCACTTCAAGAACCCCAAATCTCGTGCTTCCCAGACGAAGCAGAGGAATCACGGTGGAAAGCTCAAGTTACGCTTCGTCCTGAAAACTGAATTGGATTCTTCCAATTCTGAGGTTGATCGTTCGCTTAAAGAATTGAGCATTCTCGAGGAGCTTGATATCGCGCAAGAATTGGACCCTGGGAACAAGCACGGCTCGGAGATGAAGAATGAAGTAGGAAATAAGAGAGAAGAGAATCCTGTGAATGATTCAAACAAGGAAGGGGATAGTCTTTATAGTAGACTGTATAAGCTAATGAGGGATGCAGGGGAGCCGGACCTGTCAGAGGAACAGCTGAGTATAAATGATCAATTGCAAGCAGATGAGTTACTTGCTTTGGAGTCAATTTATGGAGAAAATGTCTTCATCCTCGAGAGATGGAAAGGTCTCCGTTTTTTTCAGATACACATACACATACACATTGAAGCTTTAGATGAAATTGGCATCACAGCTAAGCTGAATTCTTATAATGAACATAAGACTGCAAGCAGCAATGCAGATGACTTATCATACTCTTTCAAAGTTCAACATCTTCCGCCTATTATTTTGACATGTTTATTGCCAAAGTCATACCCACCCCATCAACCGCCGTATTTTATCATTTATGTTAAGTGGATGGACTCCAACAGAATTTCTAGTCTATGCTCCATGTTAGATTCAATATGGATTGAGCAGCAAGGGCAGGAAGTTATATACCAGTGGGTAGAATGGTTACGTGGTTTTTCTCTTTCTCATCTGGGATTTGATAAAGAGATTACTCTTGGTCCTCATGGCATGAAACATGTTGGAGATGAGCGCGCAGTCTCAGGAGCTGTGTCCCTTGATTTTGATATTCCTTCATTACGAACCTACAACAATGAGAAACATGATGAGAATTTCCTTAAAGAAATGCATGAATGTTGCATTTGCTTCAATACCTTTGTACAGACCCATGTAAAAGAAAGAACCATCGGTAATCTTCAATGTCCCGATTCAAAATGTTCTGTTATGATTCCACCTGCTCTGTTAAAACGCTTGCTTGATGATGAAGAGTATGAACGCTGGGAATCATTGATGTTGGAGAAAACACTTGCATCAATGTCTGATGTTGCTTATTGCCCAAGATGTGAAACACCTTGTATACAAGATGAAGAACAGCATGCTCAATGCTCTAAAATCTTCTTCAGCTTTTGTACCCTTTGCATGGAGCGACGCCATGTTGTCATAGCATGCTTGACCCTAGACACAAAGCTTCAAACGTTACAAGTATGTATCATGGCTTCATGTCTAGTTCTTCTTAGAGAGCGCCAGGATTCATCTCAATTAGAGGAAGCTCAGAAGCTGAGGGAACGTGAAAAGATTAATGAAATGCTCAGCATCAAAGAAATTCATCGTGATTCTAAGCTGTGCCCTTCTTGTCAACTGGCTATTTCCCGAATTGAAGGTTGCAATAAAACGGTGTGTCGTAATTGTGGCCAATATTTCTGTTACCACTGTAACAAAGCACTTGATAAATCTGATCCTTACGGACATTTCAGGGATGGGCCCTGTGAATTGCTCCCACAAGAAATGGTAGAGGCTTGGCAAGAACGCATAAACCAACGTCAGGTGGTAGGACAGATACAAGCTGAACTCGATTTTCAACGAGACCAACGATGTCCTAATTGTCGTCAATTTAATGCAAAGTTTGGAAATAATAATCACATGTTTTGCCAGGCATGCCGAAGCCATTATTGCTACTCTTGCAAGAAGATTCGTAGGCGTGGCAACCAGCATTATCGACCCAAGAGTGGTTGCAAACGGCACTCCTATAGAAGAGCTGAAGCCGCCGGTCGTACTTTAGGTTCATTAGAGGGAAACCTTCCGGTACTTCGAATCTATGTCTCTATCACCTTCTGTCTCCTTCATAATCACACTCTTGGTCTCGGTAATTGCCCCCACCGACTAGAAGAAGCATATGTCGTCATTCGTCAAGGAGAGCTTTTGTGGCAAGCTACATCCTTTCGGGCTATTTTTGAAAGAGAGGAACTTTAG 2121 0.414 MILVKYKFNLVIVLLTXGSMAIEAHFKNPKSRASQTKQRNHGGKLKLRFVLKTELDSSNSEVDRSLKELSILEELDIAQELDPGNKHGSEMKNEVGNKREENPVNDSNKEGDSLYSRLYKLMRDAGEPDLSEEQLSINDQLQADELLALESIYGENVFILERWKGLRFFQIHIHIHIEALDEIGITAKLNSYNEHKTASSNADDLSYSFKVQHLPPIILTCLLPKSYPPHQPPYFIIYVKWMDSNRISSLCSMLDSIWIEQQGQEVIYQWVEWLRGFSLSHLGFDKEITLGPHGMKHVGDERAVSGAVSLDFDIPSLRTYNNEKHDENFLKEMHECCICFNTFVQTHVKERTIGNLQCPDSKCSVMIPPALLKRLLDDEEYERWESLMLEKTLASMSDVAYCPRCETPCIQDEEQHAQCSKIFFSFCTLCMERRHVVIACLTLDTKLQTLQVCIMASCLVLLRERQDSSQLEEAQKLREREKINEMLSIKEIHRDSKLCPSCQLAISRIEGCNKTVCRNCGQYFCYHCNKALDKSDPYGHFRDGPCELLPQEMVEAWQERINQRQVVGQIQAELDFQRDQRCPNCRQFNAKFGNNNHMFCQACRSHYCYSCKKIRRRGNQHYRPKSGCKRHSYRRAEAAGRTLGSLEGNLPVLRIYVSITFCLLHNHTLGLGNCPHRLEEAYVVIRQGELLWQATSFRAIFEREEL 706
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0951 706 SUPERFAMILY RING/U-box 485 541 - -
Lele50g0951 706 SUPERFAMILY RING/U-box 382 445 - -
Lele50g0951 706 SMART RWD2001b 144 281 IPR006575 GO:0005515
Lele50g0951 706 MobiDBLite consensus disorder prediction 82 107 - -
Lele50g0951 706 MobiDBLite consensus disorder prediction 82 111 - -
Lele50g0951 706 FunFam RBR-type E3 ubiquitin transferase 467 576 - -
Lele50g0951 706 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 326 398 IPR013083 -
Lele50g0951 706 ProSiteProfiles RWD domain profile. 144 281 IPR006575 GO:0005515
Lele50g0951 706 PANTHER RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING 185 540 IPR031127 GO:0004842|GO:0016567
Lele50g0951 706 Gene3D Ubiquitin Conjugating Enzyme 131 283 IPR016135 -
Lele50g0951 706 ProSiteProfiles TRIAD supradomain profile. 302 552 IPR044066 -
Lele50g0951 706 Gene3D - 467 576 - -
Lele50g0951 706 SUPERFAMILY UBC-like 138 277 IPR016135 -
Lele50g0951 706 Pfam IBR domain, a half RING-finger domain 382 440 IPR002867 -
Lele50g0951 706 SUPERFAMILY RING/U-box 335 393 - -
Lele50g0951 706 SMART ibrneu5 382 440 IPR002867 -
Lele50g0951 706 SMART ibrneu5 481 546 IPR002867 -
Lele50g0951 706 SUPERFAMILY RING/U-box 577 621 - -
Lele50g0951 706 Pfam RWD domain 140 276 IPR006575 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0951 Lele-ChrLele50 6008285 6016529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0951 336 554 ARIADNE family AT3G27710 21.239 4.00e-08 54.7