Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0941 ATGTTGCCGCCGCCTCCTTCCGATACTTCGCCGTTCCCGGACGGGGGCCTGTTGTTGATGGAAGAGGACAAGTCTCTGGCATTGGAGCTCGCCGTGTCGTCCATGGAAGAACTCGTGAAGATGTGTCAGGCAAACGAGCCGCTTTGGATGACAAACAGTGAGAATAGTGAGAGGGAAATGCTGAATTTTGAGGAGCATGCTAGGCTCTTTCGTTGGCCTCTCAACCTCAAGAACCATTCTACTGAACTCAGAAGAGAAGCTAGCCGCGACACTGCTGTAGTTATAATGAATAGCGTCACTCTTGTTGACGCCTTCCTTGATGCTGTGAAGTGGATGGAATTGTTCCCCACCATTGTTTCTAGGGCAAAAACTGTACAAATTATATCGTCTGGTGCTTCTGGTCATGCGAGTGGGTCTCTTCAACTGGGTGAGATATCAGCTCTTGAAGATCCTTCTCTTTTCTTTTCCATTATTTTACTAAGTGTAAAATCTCGTGCGTATAGTGTTGCAGTGATACCTTCACCAGAAGCGAGAAAGAACTTGATGAAACTGGCGCAAAGAATGATAAGAACGTTTAGCCTGAACATGAGCACGTCGAGTGGACAATCATGGACGGCGTTATCAGATTCTGCTCAAGACACTGTTAGAATTACAACGAGGAAGATTACAAATCCAGGGCAACCTAATGGGGTCATACTCAGTGCAGTATCCACCACTTGGCTTCCTTATTCTCACTCCAAGGTCTTTGACCTCCTCAAGGACGAACGTCTCAGATCTCAGTTGGATTTTCTCTCCAATGGGAACTCCTTGCATGAAGTGGCTCATATTGCAAATGGTTCACATCCAGGAAATTGCATCTCCCTTTTGCGCATAAACGTGGCGAGCAACTCGTCTCAGAACGTAGAGCTAGTGGTGCAAGAGAGCTGCACCGATCAGTCGGGAAGTCTAGTGGTGTACGCCACCATCGACGTGGAATCCATCCAGTTCGCCATGTCCGGCGAGGACCCTTCCTCCATAGCACTACTTCCGCAAGGCTTCGTCATCGTTCCTGCAACAACCTCCGCCGCAGCCACCAATGCCAGTTCAACTGAATCCCCCGCCAACGCCGCTCCTTCGACTCTGAACCAAGCTTGTCTTCTCACAGTGGGCCTCCAAGTCCTGGCCAGCGCCATCCCTTCAGCGAAACTGAACCTCTCCAGCGTCACCGCCATTAACAACCATCTCTGCAACACTCTCCACCAGATCGAAGCCGCTCTTTGCACTGGCAATGCCACTTATGTCACTGAACCCTCCGCCGCCGCCACTGCTACTACCCCTAAGCAATAG 1326 0.5015 MLPPPPSDTSPFPDGGLLLMEEDKSLALELAVSSMEELVKMCQANEPLWMTNSENSEREMLNFEEHARLFRWPLNLKNHSTELRREASRDTAVVIMNSVTLVDAFLDAVKWMELFPTIVSRAKTVQIISSGASGHASGSLQLGEISALEDPSLFFSIILLSVKSRAYSVAVIPSPEARKNLMKLAQRMIRTFSLNMSTSSGQSWTALSDSAQDTVRITTRKITNPGQPNGVILSAVSTTWLPYSHSKVFDLLKDERLRSQLDFLSNGNSLHEVAHIANGSHPGNCISLLRINVASNSSQNVELVVQESCTDQSGSLVVYATIDVESIQFAMSGEDPSSIALLPQGFVIVPATTSAAATNASSTESPANAAPSTLNQACLLTVGLQVLASAIPSAKLNLSSVTAINNHLCNTLHQIEAALCTGNATYVTEPSAAATATTPKQ 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0941 441 SUPERFAMILY Bet v1-like 186 416 - -
Lele50g0941 441 SUPERFAMILY Bet v1-like 21 132 - -
Lele50g0941 441 Pfam START domain 30 138 IPR002913 GO:0008289
Lele50g0941 441 ProSiteProfiles START domain profile. 20 133 IPR002913 GO:0008289
Lele50g0941 441 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 162 419 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0941 Lele-ChrLele50 5959372 5962044 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0941 168 419 Homeobox Transcription Factor Family AT5G46880 61.905 6.49e-101 317