Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0938 ATGCCCAAATCCAAACCTTCTTCTGATAATCTTATTCATCACCGTAACTCCACCTTCGACCTCTCTCTCTCCTCCTCCAATCTTACATCCACCACACCTCCTTCATCTTCTTCACTCTACAGCAACAACTCTAACCTCATCCACCACCACCGTCATTTACTCCGAAACGGCAACAATAATGCCAATCCCTTACTGTCGCCGTCGTCATCGTTTCCCTACTCCCACCACCACCGCCACAGTCTCGGCTTTCTCAGACCTATCAGAGGAATCCCTCTCTACCAAAACCCTCCTCCTCCTTCAGCTTCTTCTAACATCCCATTCGGTGCTCTTGTTGATGCGCATACTTATTCCCCTGTTACTCCTCCTCCTCATCCTTCATCTCTATCTAACATTAACAATATGACCTCTTCCACAACATCTTCGTCGAGTCCCTTTCGATCTCACCAAGGTTTGATAAGGTCTAGGTTGTTGTCTCGTTTCCCTGCTAAGCGCAGCATGAGAGCTCCTCGCATGCGTTGGACTACCACCCTCCATGCTCGCTTTGTTCATGCCGTTGAGCTTCTCGGTGGCCATGAAAGGGCAACACCAAAATCAGTTCTTGAGCTAATGGATGTGAAGGATCTCACTTTAGCTCATGTTAAATCTCATCTACAGATGTACCGAACGGTGAAAACCACAGATAAAGCGGCTGCTTCCTCAGCGCAATCTGATGTATATGATAATGGATCATCTGGAGATAATTCTGAAGATTTCATGTTTGACATGAACAATTCATCCAGAAGGTCTGACGTATCTTCTACCAAGCAAGCAAAAGAAGGTGCTAATCGTGGGTTTTGGAGCAACTCTTCCAGGGAAGCTTGGTTGAATGGGAGGCCAAAGCTGGATTATTGTGCAGGAAACTTGAGTTCTTTTGAGAAGGAAATTGATCCAACAAAATGCCTAAGTTACGAGAGAGTATCAGATGGAAGTGCATCGTCAGATCTTTCAGGAACAAGCCCCAAGAAACCAAATTTGGATTTGGAGTTTAGCTTAGGGCAGCCACTTTGA 1047 0.4585 MPKSKPSSDNLIHHRNSTFDLSLSSSNLTSTTPPSSSSLYSNNSNLIHHHRHLLRNGNNNANPLLSPSSSFPYSHHHRHSLGFLRPIRGIPLYQNPPPPSASSNIPFGALVDAHTYSPVTPPPHPSSLSNINNMTSSTTSSSSPFRSHQGLIRSRLLSRFPAKRSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDKAAASSAQSDVYDNGSSGDNSEDFMFDMNNSSRRSDVSSTKQAKEGANRGFWSNSSREAWLNGRPKLDYCAGNLSSFEKEIDPTKCLSYERVSDGSASSDLSGTSPKKPNLDLEFSLGQPL 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0938 348 MobiDBLite consensus disorder prediction 116 148 - -
Lele50g0938 348 MobiDBLite consensus disorder prediction 22 43 - -
Lele50g0938 348 MobiDBLite consensus disorder prediction 126 148 - -
Lele50g0938 348 MobiDBLite consensus disorder prediction 319 348 - -
Lele50g0938 348 Pfam Myb-like DNA-binding domain 170 221 IPR001005 -
Lele50g0938 348 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 169 222 IPR006447 GO:0003677
Lele50g0938 348 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 20 347 IPR044847 GO:0000976|GO:0006355|GO:0010158
Lele50g0938 348 MobiDBLite consensus disorder prediction 319 333 - -
Lele50g0938 348 Gene3D - 168 225 - -
Lele50g0938 348 FunFam Myb family transcription factor 167 225 - -
Lele50g0938 348 SUPERFAMILY Homeodomain-like 166 222 IPR009057 -
Lele50g0938 348 MobiDBLite consensus disorder prediction 226 277 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0938 Lele-ChrLele50 5922768 5927188 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0938 80 347 G2-like Transcription Factor Family AT4G17695 45.421 5.85e-58 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Lele50g0938 Myb_DNA-binding 1.6e-05 CL0123