Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0930 ATGAGATTCCCGGCTTTTTATCGTTGGTTGGCGGAGAAGTATCCGTTAGCGGTGGTGGACGTGACTGAGGAGGAAACCGTCGTAATCGACGGCGTCCAAATTCCCGTCGTTACAAGTAAGAAGAACCGTAACGACATCGAATATGATAACCTCTACCTCGACATGAATAGCATCATTCACCCTAACCTCTACCTCGACATGAATAGCATCATTCTCCCCTGCTTCCACCCTGAGGATCGGCCATCACCAACTACGTATAATGAAGTGTTCCAGTGCATGTTTCAATATATTGACAGGTTATTCGTCATAGTGCGGCCACGGAAGTTGCTATTTGTGGCTATTGATGGTGTTTCCCCTAGGGCTAAAATGAACCAACAGCGATCTAGACGATTCAGAGCAGAAAAAGATGCAGCAGAAGCAGCTTCTGGAGAAGAAGGGGAGCAAAAGATTATGTCATATATTAAGCTTCAGAGAAATCTGAGTCGTTATGATCCAAATACACGGCCTTGCCTGTATGGTTTGGATGCATATTTGATTATGTTGGCTTTAGCTACCCTTGAAATTCATTTATCGGGCTTAAGAGAGATTAAAAAGCCCTTCCAGTTTCTAAACATTTGGACTCTGAGGGAATATCTTGAATATGAGATGAGAATACCAAATCTTCCAGTTGAGATTGATTTTGAACGCATTGTAGATGATTTTATCTTCATAAACCATGTTGGACCAGCCACAACAGAATTTTCAAATCTTGAAATGGCCAAGCCTTCTTCTGAGTGGCCTCATAAAGTTACTAGGTTATCTTCAGGAGCAGTAACTATTGGTACTGCTATTGTTGAAGCTGAGAGTAATCTTGAAATTGATGTTCAAGATAACAAAGATGAATTGAAAGCTAACACAGAAGAGAACAAGATTAAGTTGGGAGAACTAGGCTGGAAAGAGAGGGGTTTGTTCTTGGCAGTGGAAATGGATATTACTCATCCAAACTCAGCAATTATTGATTTTTATCCGAATGATTTTGAAGGGGACATGAATAATGGCAAACGCCATGCTTTGCAGGGTGTTTCAGCAAAGGAAACCAGGAGGAACAGTGTTATGTTTGGATTGCTTTTAGTGGTGGAATCAACTGTTACATATCATCGCTGTGTTGGAGAAGAAGAACATTGCCCACCAGTTTTCAGGTCTCCTGTTGAAGCCATGGAAGATATTGTGGACAACCTAGTCATATGTGCGATATACAGACAACCAGATAAGCATAAGCACATGACTCGGTCACCTAAAGGAATTGAATATCCTAAGAAGATAGTGACAGTTGATGATCTGGAACCTGAAGTTTTACTTAATAAGAAAGTTGCTATAAGGGAAACCGGAGAGAAAGATGTGAGATTCAAAGTTATGTATTGTGGAATATGCCACACCGACGTCAACATGGTCAAGAACGATTGGGGCATTTCCGTCTATCCCCTTGTACCTGGGCATGAGATTGCTGGCGTAGTAACGGAGGTGGGAAGCAAGGTAGAGAAGTTCAAAGTTGGAGACAGGGTTGGTGTGGGATACTTGGTTGGCTCCTGCCGTTCATGTCAAAGCTGTTCCGACGACCTTGAGAATCAGTGCTCAAAACAAATTCTTACTTCTGGTGCTAAGTATGTAGATGGAACTATGACACATGGAGGCTACTCAGATTTTATGGTTGCAGACGAGCACTTTGTGGTTCGCATTCCAGATTCTATGCCTCTTGATGCTGCAGCTCCTCTGCTTTGTGCTGGAATCTCAGTGTATAGCCCTTTGAGGTACTTTGGTCTGGACAAGCCAGGCCTTCATGTGGGTGTGGTTGGTCTTGGTGGCCTTGGCCATATGGCTGTCAAGTTTTCTAAAGCCTTTGGAGCTAAGGTCACTGTCATCAGTACTTCTGCGAACAAAAAGAAGGAAGCCATTGAACATCTTGGAGCTGACTCCTTTGTTGTCAGTCGCGAGCAAGATCAGATGCAAGCTGCAAGGGGGACTTTGGATGGGATCATTGACACAGTTTCTGCACAGCATCCTCTGGTACCTTTGATTGATCTGTTGAAGTCTAATGGAAAAGTTGTATTGGTGGGTGCACCTGAAAAGCCTCTAGAGCTGGCAGTGTTTCCTTTACTTGCGGGGAGAAAGATGGTAACTGGGAGTTATGTCGGAGGGTTGAAGGAAACACAAGAAATGATGGATTTTGCTGCTAAGCACAATGTGAAACCTGACACAGAAGTAATTCCAGTGGATTACGTGAATACAGCAATGGAACGTCTCCTTAAAGCTGATGTCAAATATCGTTTTGTGATTGACATTGCCAACACATTGAAGCCAACAACCTCACAGATTTGCTAA 2358 0.4313 MRFPAFYRWLAEKYPLAVVDVTEEETVVIDGVQIPVVTSKKNRNDIEYDNLYLDMNSIIHPNLYLDMNSIILPCFHPEDRPSPTTYNEVFQCMFQYIDRLFVIVRPRKLLFVAIDGVSPRAKMNQQRSRRFRAEKDAAEAASGEEGEQKIMSYIKLQRNLSRYDPNTRPCLYGLDAYLIMLALATLEIHLSGLREIKKPFQFLNIWTLREYLEYEMRIPNLPVEIDFERIVDDFIFINHVGPATTEFSNLEMAKPSSEWPHKVTRLSSGAVTIGTAIVEAESNLEIDVQDNKDELKANTEENKIKLGELGWKERGLFLAVEMDITHPNSAIIDFYPNDFEGDMNNGKRHALQGVSAKETRRNSVMFGLLLVVESTVTYHRCVGEEEHCPPVFRSPVEAMEDIVDNLVICAIYRQPDKHKHMTRSPKGIEYPKKIVTVDDLEPEVLLNKKVAIRETGEKDVRFKVMYCGICHTDVNMVKNDWGISVYPLVPGHEIAGVVTEVGSKVEKFKVGDRVGVGYLVGSCRSCQSCSDDLENQCSKQILTSGAKYVDGTMTHGGYSDFMVADEHFVVRIPDSMPLDAAAPLLCAGISVYSPLRYFGLDKPGLHVGVVGLGGLGHMAVKFSKAFGAKVTVISTSANKKKEAIEHLGADSFVVSREQDQMQAARGTLDGIIDTVSAQHPLVPLIDLLKSNGKVVLVGAPEKPLELAVFPLLAGRKMVTGSYVGGLKETQEMMDFAAKHNVKPDTEVIPVDYVNTAMERLLKADVKYRFVIDIANTLKPTTSQIC 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0930 785 PANTHER ALDEHYDE REDUCTASE 443 776 - -
Lele50g0930 785 Gene3D - 448 773 - -
Lele50g0930 785 SMART PKS_ER_names_mod 438 771 IPR020843 GO:0016491
Lele50g0930 785 CDD CAD1 453 772 - -
Lele50g0930 785 FunFam Cinnamyl alcohol dehydrogenase 587 743 - -
Lele50g0930 785 Pfam Zinc-binding dehydrogenase 614 737 IPR013149 -
Lele50g0930 785 Pfam Alcohol dehydrogenase GroES-like domain 458 571 IPR013154 -
Lele50g0930 785 FunFam Uncharacterized protein 439 586 - -
Lele50g0930 785 Gene3D - 587 743 - -
Lele50g0930 785 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 576 742 IPR036291 -
Lele50g0930 785 CDD PIN_XRN1-2-like 63 212 - -
Lele50g0930 785 FunFam Putative cinnamyl alcohol dehydrogenase 6 744 773 - -
Lele50g0930 785 Gene3D - 1 61 - -
Lele50g0930 785 Gene3D - 62 271 - -
Lele50g0930 785 SUPERFAMILY GroES-like 442 604 IPR011032 -
Lele50g0930 785 Pfam XRN 5'-3' exonuclease N-terminus 145 195 IPR004859 GO:0003676|GO:0004527
Lele50g0930 785 Pfam XRN 5'-3' exonuclease N-terminus 1 61 IPR004859 GO:0003676|GO:0004527
Lele50g0930 785 Pfam XRN 5'-3' exonuclease N-terminus 62 140 IPR004859 GO:0003676|GO:0004527
Lele50g0930 785 Pfam Xrn1 helical domain 384 440 IPR041412 -
Lele50g0930 785 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 491 505 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0930 Lele-ChrLele50 5861611 5867688 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0930 453 779 Monolignol Biosynthesis Gene Families AT4G37990 70.031 6.47e-152 446