Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0917 ATGGCAGAAAGTCCGGTGTTGTTCTTACTCGACAAGCTGACGTCTTTATTGCAAGAAGAAGTTATGCTTTTGAACGGTGTTCGAACAGAGGTTCAGTTCATCAAAGACGAACTTGAACGCCTCAAGGCCATCTTAAGAATGGCCGATGCTTTGGAGGACAAAGACCCAGAACTCAAAGTTTGGGTGAAACAAGTCAGAGATGTAGCTCACGACATGGAAGACGCCATTGATGAGTTCACTATTCGCCTCGTAAACCATCGTGGCCATGGCCACAATTCTGCTCTCAGAAGGTTCTTTTCCGCCATTCAAGCTCTCAGAGCTCGGCATCGGATTGCTTCCGACATACAAGAAATCAAAGAAAGAGGGGAAAATGTCTCAAAGGAACGTCGCAGCTTAACTGAGACTAGTTCAAGCTCGAGTCTTTTTTATACATCGAGGCTTGATAGTCAAGGAGACGCGCTTCTGCTTGAGGAAGCTGATCTTGTGGGTATTGAGAAGCCAAAGAAACAGCTAATTGATTTGCTTTTGCAGGAGGAACAAGGAAAAGTGGTGATTCCTATCTATGGAATAGGAGGGTTGGGGAAAACCACGGTGGCAAAGCAAGTTTATGATGATCCAAAAGTGAAGAAACGTTTTAAGATGCATGCTTGGGTCACAGTTTCTCAATCCTTCAAGATCAAAGAGCTCCTGAGAGACATGGTTCAACAGCTTTATAAAGTTATTGGAAAACCAGCTCCTGCAGAAATTGGCACAATGAAAGTTGACAGTCTGAAGGAGATGGTCAAGAGTCTGCTTCAACAAAGCAGGTACCTCATCGTACTAGATGACATATGGAGGGTAAATTCATGGGACTCTATCAAACTTGCTTTGCCTAACAACAATTATGGTAGTAGAATAATGGTCACCACAAGGAACAAAGATGTAGCACTTTCTTGTTGTAGTGAGTTACAAGGTAAGATCTATAACCTGGAATTCTTACCTCACAATGAAGCCTGGTCTCTTTTCTGTAAGAAAACGTTTCAGGGGAATTCATGTCCTCCTCATTTAGAGGAGCCATGTAAGAGTATATTGAGAAGATGCGGGGGGTTGCCTTTGGCAATCGTGGCAATTAGTGGTGCTTTGGCTACAAAAGACAGGACCAACATGGAAGAATGGTCTGTTGTCAGTAGAAGTTTTGCATCTGAAATTGAAGGCAATGACAAAATGGAGGATATGAACAAAGTGCTTTCTCTAAGTTTCAATGACTTGCCTTACTATCTTAAATCCTGTCTGTTGTACCTGATCATCTTCCCAGAATTTTACGCCATCGAGCATATGAGGTTGATTCGGTTGTGGATAGCTGAAGGGTTTGTCAATGGAGAAGAAGGAAGGACACTAGAAGAAGTTGCAGAGAGTTACCTGAAGGAGCTCTTGAACAGAAGTCTGATTCAAGTGGTAGAGAAAGGCACCGATGGCAGGATGAAGACTTGTCGTGTTCATGACTTTCTTCGGGACATCATTAATTTGAAGTCAAAAGATCAGAACTTTGCAACAATAGCTAGAGACCAGGACATAATCTGGCCAGAAAGAGTTCGTCGCTTATCAGTAATGAATAGCTTACAAAACATACAGCAAAATAGGACCCCATTCCAATTGCGTTCTCTGCTGCTGTTTTCTTTAGCAGATTCACATGATCATATCTCCATATCTGCATTATTCTCACGTGGTTGTAGGCTGCTCAAGGTGCTAGATCTGCAAGATGCACCTTTGGAATCATTTCCTACTGAAATTGTCAACCTTTACCACCTCAAGTATCTAAGCCTGAAGAATACTAAGGTAAAAAGCATTCCAGGATCCATTAAGAAGCTTCAAAACCTGGAAACATTAGATCTCAAACACTCCAATGTCACTGAATTGCCAGTTGAAATCTTGGAGTTGCATCGACTACGCCATCTCCTGGTGTATTTTTACGAGATCGAATCCTATGCTCATATCCACTCAAGACATGGTTTCAAGCTACCTGGTCCAATAGGACGCATGCAATCTCTGCAAAAGCTTTGTTTCATAGACGCAGACCAAGGAAGTCAAGAATTGATGGTTGAACTAGGAAAGCTGACTCAACTCAGAAGGCTGGGCATAAGAAAGCTGAAGAAAGAAGATGGGGCTGCTTTGTGTTCATCCATTCAGAAAATGACTAATCTCAGATCTTTATCCATAACTGCAATTGAAGAAGATGAGATCATTGACATTCAAAACATTGCCAAACCTCCACCATACCTGAGACAATTATACTTATATGGACGTTTGGAGAAGTTACCTGAATGGATACCTTCTCTACATAATCTAGTTAGAGTGTATCTGAAATGGAGCAGGTTAGAGGAGGATCCTCTGGTGTATCTTCAAGATTTGCCAAATCTAATTCATCTCGAGTTTTTACAGGTTTATGTCGGCGAGACGCTGCATTTCAAGGCAGAGAAATTTCCAAGTCTGAAGCTTTTAGGCCTTGATGATTTGGATGGACTAAAATCCATGATAGTGGAGGAAGGAGCAATGCCTAATCTGAAAAGATTGATTATCCAGAGATGTGGATCATTGAAGAAGGTTCCCTCAGGTATAGAACATTTGAGTAAGCTAAAAGCAATTGACTTTTTTGATATGCCTGATGAATTGATCAATGCACTGAGTCCAAATGGAGGTGAAGATCATTGGAGAGTAGAACATGTACCTGCGGTTTATTCAACCTACTGGAAATCTGGTACATGGGATGTTTACTCACTGGATACATTTGGAGAGAGAGATAGTTCTTCAAGTAATAATGTTGCAAGGAAAAGTCATGAGCTTCGTACACTTTGGAAGTCTGAGATCGAAGATGACCAAAATGCCATGGTTATTGTTATTCTAACCAGACAAAATCCATCACATAGTTCCATTGGAGTTGAAGACCATTGGCGAACAGATCACAAACCGGCTGTTTATTCGATCTACTCGAGTTCATCAATGGTGGCTGATACTTTCGAGGACGAAGAACCAGAACTCAAAGTTTGGGTGAAGCAACTCGGAGATGGAGCTCAACACGTAGAAGATGTCTTTGATAAGTTCAGTCGTCGCCCCGTGAATTACCGCGCCATGACCACGATTCTTCGTGTAAAAGGCTTGCTTCCGCCATTCAAGCTCTCAGAGCTCCACATGGGATTGCTTCTGACATGGAAGAGATCAAAGGCAACTAGAGACCATCTCAAAGGGTCGTCCCGGCATAACTGA 3240 0.4216 MAESPVLFLLDKLTSLLQEEVMLLNGVRTEVQFIKDELERLKAILRMADALEDKDPELKVWVKQVRDVAHDMEDAIDEFTIRLVNHRGHGHNSALRRFFSAIQALRARHRIASDIQEIKERGENVSKERRSLTETSSSSSLFYTSRLDSQGDALLLEEADLVGIEKPKKQLIDLLLQEEQGKVVIPIYGIGGLGKTTVAKQVYDDPKVKKRFKMHAWVTVSQSFKIKELLRDMVQQLYKVIGKPAPAEIGTMKVDSLKEMVKSLLQQSRYLIVLDDIWRVNSWDSIKLALPNNNYGSRIMVTTRNKDVALSCCSELQGKIYNLEFLPHNEAWSLFCKKTFQGNSCPPHLEEPCKSILRRCGGLPLAIVAISGALATKDRTNMEEWSVVSRSFASEIEGNDKMEDMNKVLSLSFNDLPYYLKSCLLYLIIFPEFYAIEHMRLIRLWIAEGFVNGEEGRTLEEVAESYLKELLNRSLIQVVEKGTDGRMKTCRVHDFLRDIINLKSKDQNFATIARDQDIIWPERVRRLSVMNSLQNIQQNRTPFQLRSLLLFSLADSHDHISISALFSRGCRLLKVLDLQDAPLESFPTEIVNLYHLKYLSLKNTKVKSIPGSIKKLQNLETLDLKHSNVTELPVEILELHRLRHLLVYFYEIESYAHIHSRHGFKLPGPIGRMQSLQKLCFIDADQGSQELMVELGKLTQLRRLGIRKLKKEDGAALCSSIQKMTNLRSLSITAIEEDEIIDIQNIAKPPPYLRQLYLYGRLEKLPEWIPSLHNLVRVYLKWSRLEEDPLVYLQDLPNLIHLEFLQVYVGETLHFKAEKFPSLKLLGLDDLDGLKSMIVEEGAMPNLKRLIIQRCGSLKKVPSGIEHLSKLKAIDFFDMPDELINALSPNGGEDHWRVEHVPAVYSTYWKSGTWDVYSLDTFGERDSSSSNNVARKSHELRTLWKSEIEDDQNAMVIVILTRQNPSHSSIGVEDHWRTDHKPAVYSIYSSSSMVADTFEDEEPELKVWVKQLGDGAQHVEDVFDKFSRRPVNYRAMTTILRVKGLLPPFKLSELHMGLLLTWKRSKATRDHLKGSSRHN 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0917 1079 Coils Coil 115 135 - -
Lele50g0917 1079 Gene3D Ribonuclease Inhibitor 658 884 IPR032675 -
Lele50g0917 1079 CDD RX-CC_like 2 127 IPR038005 -
Lele50g0917 1079 SUPERFAMILY L domain-like 492 882 - -
Lele50g0917 1079 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 156 427 IPR027417 -
Lele50g0917 1079 Pfam Leucine rich repeat 572 628 IPR001611 GO:0005515
Lele50g0917 1079 FunFam Probable disease resistance protein At1g63360 413 502 - -
Lele50g0917 1079 Gene3D - 326 412 IPR042197 -
Lele50g0917 1079 PANTHER DISEASE RESISTANCE PROTEIN RP 27 859 IPR044974 GO:0006952
Lele50g0917 1079 PRINTS Disease resistance protein signature 184 199 - -
Lele50g0917 1079 PRINTS Disease resistance protein signature 360 374 - -
Lele50g0917 1079 PRINTS Disease resistance protein signature 264 278 - -
Lele50g0917 1079 PRINTS Disease resistance protein signature 614 630 - -
Lele50g0917 1079 FunFam Probable disease resistance protein At1g61300 152 315 - -
Lele50g0917 1079 Pfam NB-ARC domain 165 414 IPR002182 GO:0043531
Lele50g0917 1079 Coils Coil 24 54 - -
Lele50g0917 1079 Gene3D - 6 112 - -
Lele50g0917 1079 Gene3D - 150 317 IPR027417 -
Lele50g0917 1079 Gene3D Ribonuclease Inhibitor 503 657 IPR032675 -
Lele50g0917 1079 Pfam Rx N-terminal domain 7 93 IPR041118 -
Lele50g0917 1079 Gene3D - 413 502 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0917 Lele-ChrLele50 5775654 5780262 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0917 184 627 WRKY Transcription Factor Family AT5G45050 21.909 1.81e-07 53.5