Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0910 ATGGCTGGCCTGCAAAACTCATTGATCTATCTTCACAACTTTCTCATCCTATTACTGTGTTGCATCGATGCGATTGCAGAAACCAACACTCTGAATCAATCAGACACACTCAACTCCACAAGTGGCTTGGTTTCCAACAACAAGAATTTCACCTTAGGATTCGTCAAACCTGTCTCCTATAGCAACAACACTTATTTAGCAATCTGGAATTCCAAGTATGAGTCACCTTCATCACCAGTTTGGATCGCCAACAGAGACACCCCTATTACTAACGGTTCTGATCCAACTCTCTTCATCGACAACAACACCGGAATGCTCGTCATCAATCGAACTCATGGCCACCCAATTCAACTATGCCCCGGCGGGGAAACCACTACCAAAACCAACAACGTTAACAGCACCAACACAAAGGCTGTTTTGCTGGACAATGGGAACCTCGTACTGAGAGAAGTGAACTCCAATGGATCTTTCGGTCGAACCTTGTGGCAGAGCTTTGATTGTCCCACAGACACTCTTTTACCCGGCATGAAACTTGGCGTCAATCACAGAACAGGAAGGAACTGGTCTCTAACCTCATGGCTAGCTCCAGATGATCCATCTCCAGGAGCTTTTACACTCGAATGGGATCCACATGGATTAGAGCTGGTTCTTCGACGTAGAGGGGTTGTGTTTTGGAAAAGTGGGGCCTTGACTGATGATCCTGATGAGGATGGAATGACATTTGGGAACATAGGACAAACCACCTCCAACCTTATACATCCTTATAAGATGATGTATAGAACAACTTCAGATGAAGAGTTCTTCAATTATGCTTTGAAACATGATCGTCTAGATCCTTATCCTCATGAAAGCATAGTATGGAGAATAGATTACGATGGTAGTTTTTGGTTTGAGAATAGTGGAGTGCCATTAAGGGAGTATTGTTATGGGTACAAGACAAATGAAGATGAGGGTTGTGCAGAATGGGAACAGCCTCAGTGTAGGATTTACAATACAACGTTTGAGTTGTTTTCTGGAGACTTTGTGAATAAAAGTGATGGAAGCTTTGTTGAGGTTGATGATAAAAGGATGGGTCCTGCTGATTGTAGAGTTAGTTGCTGGAATGATTGTGATTGTCAAGCATATCAGAAAATGGGCACGTTAAGTTGTGTTCAATATCACCAAGATGCAGAGTTTCGACCTGATCCGTCCGGGAATTCGCCGCAATTTTATGTCATCCGACAACCACGAAATAGCCTTGAAGAAAGGAACAAGAAGAAATGGATTGCAATTTCAGTTCCCATGGCAATATTATTGTTGTTAGCGTCTGTCATTGTTATAATCTTTTATTGGCGACGAAAAACAAAAGGGAGAAAAAAGGACCATCTACATCAACTGATGACAGAAACTAGTAGTTTACACAATATAGATGAGCTTGGATATGATAATGGGTTTTCTCAACATTTGAAACTGTTCAGCTTTTTGTCTATCGTTGAAGCTACAGATAATTTTTCAGCAGAAAATAAGCTTGGACAAGGTGGTTTTGGTCCTGTTTATAAGGGAAAACTACCAGAAGGGGAACAAATTGCAGTAAAAATGCTATCAAGAAGTTCAGGACAAGGATTAGTGGAGTTTAAGAATGAATTAATACTCATAGCGAAGTTACAGCACATGAATCTAGTTCGTTTGCTTGGATGCTGCGTACAATCTGAGGAAAAGATGTTGGTTTACGAATACATGCCTAACAAAAGTTTGGACTCCTTTCTCTTTGATGCAACAAAGAAGGGTGCTTTAAATTGGAATATGCGGGTGATGATTATTGAAGGGATTTCACAAGGACTTCTTTACCTTCATCAACATTCAAGATTAAGAATCATACACAGAGATTTAAAAACAAGTAATATATTACTCGATGCAGACATGAATCCTAAGATCTCAGACTTTGGAATGGCTAAAATTTTCAAACGGGATGAACTCATTGCTAACACTAATAGGATTGTTGGGACATATGGTTACATGTCTCCTGAGTATGCAATGGATGGAATGTTCTCTATAAAATCAGATATATTCAGTTTTGGCGTCATAATCCTTGAAATTTTAAGTGGCAAGAGAAACAACAGCTTCTATAACATCAATAAACCTATGAATTTAGTAAAATATGCTTGGGATTTGTGGCAAAATGGAGTTGGCTTAGAGTTGATGGATCCAACATTAAGTGATTCATGTTTCAACCAACAATTTCTTAGATTTATTCATATAGGTCTTTTGTGCATGGAAGAATCTCCGGCAAATAGACCAACTACTTCAGAAGTCATTTTTATGATCACAAATGAAAGTGTTATTTTGCCAATGGTAAAGAAACCTGCATTTACAAATTTAGAGACTGCCACTGATGTAGACTCTCAAAAAGATGATTTAGAATATAATTCCACCAACAATATGTCCGTATCTACCATGAATGGAAGATAA 2448 0.3913 MAGLQNSLIYLHNFLILLLCCIDAIAETNTLNQSDTLNSTSGLVSNNKNFTLGFVKPVSYSNNTYLAIWNSKYESPSSPVWIANRDTPITNGSDPTLFIDNNTGMLVINRTHGHPIQLCPGGETTTKTNNVNSTNTKAVLLDNGNLVLREVNSNGSFGRTLWQSFDCPTDTLLPGMKLGVNHRTGRNWSLTSWLAPDDPSPGAFTLEWDPHGLELVLRRRGVVFWKSGALTDDPDEDGMTFGNIGQTTSNLIHPYKMMYRTTSDEEFFNYALKHDRLDPYPHESIVWRIDYDGSFWFENSGVPLREYCYGYKTNEDEGCAEWEQPQCRIYNTTFELFSGDFVNKSDGSFVEVDDKRMGPADCRVSCWNDCDCQAYQKMGTLSCVQYHQDAEFRPDPSGNSPQFYVIRQPRNSLEERNKKKWIAISVPMAILLLLASVIVIIFYWRRKTKGRKKDHLHQLMTETSSLHNIDELGYDNGFSQHLKLFSFLSIVEATDNFSAENKLGQGGFGPVYKGKLPEGEQIAVKMLSRSSGQGLVEFKNELILIAKLQHMNLVRLLGCCVQSEEKMLVYEYMPNKSLDSFLFDATKKGALNWNMRVMIIEGISQGLLYLHQHSRLRIIHRDLKTSNILLDADMNPKISDFGMAKIFKRDELIANTNRIVGTYGYMSPEYAMDGMFSIKSDIFSFGVIILEILSGKRNNSFYNINKPMNLVKYAWDLWQNGVGLELMDPTLSDSCFNQQFLRFIHIGLLCMEESPANRPTTSEVIFMITNESVILPMVKKPAFTNLETATDVDSQKDDLEYNSTNNMSVSTMNGR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0910 815 ProSiteProfiles Protein kinase domain profile. 497 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0910 815 CDD B_lectin 34 168 IPR001480 -
Lele50g0910 815 SUPERFAMILY alpha-D-mannose-specific plant lectins 79 199 IPR036426 -
Lele50g0910 815 Gene3D Phosphorylase Kinase; domain 1 474 572 - -
Lele50g0910 815 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 137 793 - -
Lele50g0910 815 SMART blect_4 28 168 IPR001480 -
Lele50g0910 815 SMART serkin_6 497 767 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0910 815 ProSitePatterns Serine/Threonine protein kinases active-site signature. 618 630 IPR008271 GO:0004672|GO:0006468
Lele50g0910 815 ProSiteProfiles Bulb-type lectin domain profile. 28 161 IPR001480 -
Lele50g0910 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 462 572 - -
Lele50g0910 815 Pfam D-mannose binding lectin 79 193 IPR001480 -
Lele50g0910 815 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 573 776 - -
Lele50g0910 815 PIRSF SRK 307 815 IPR024171 GO:0004674
Lele50g0910 815 PIRSF SRK 2 295 IPR024171 GO:0004674
Lele50g0910 815 Pfam Protein tyrosine and serine/threonine kinase 499 708 IPR001245 GO:0004672|GO:0006468
Lele50g0910 815 SUPERFAMILY Protein kinase-like (PK-like) 478 786 IPR011009 -
Lele50g0910 815 Gene3D Transferase(Phosphotransferase) domain 1 573 775 - -
Lele50g0910 815 Gene3D - 24 166 IPR036426 -
Lele50g0910 815 CDD STKc_IRAK 503 770 - -
Lele50g0910 815 Pfam PAN-like domain 348 389 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0910 Lele-ChrLele50 5738249 5741523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0910 451 809 Receptor kinase-like Gene Family AT4G11530 54.167 2.91e-126 392
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele50g0910 PK_Tyr_Ser-Thr 2.4e-46 CL0016