Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0894 ATGGAGAGGTACAAGTTAATCAAGGAAGTTGGTAATGGAACATTTGGGAGTGTCTGGAGAGCTATTAATAAGCAAACTGGTGAAGTTGTTGCAATCAAGAAAATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAATCTGAGAGAGGTCAAGTCATTGAGGAAAATGAACCACCCTAATATCGTGAAACTGAAGGAAGTTATTCGAGAATGTGACATTCTATACTTTGTTTTTGAGTACATGGAATACAACCTGTACCAACTGATGAAAGACAGGTCAAAGCTATTTTCTGAAGGTCAAGTTAGAAATTGGTGTTTTCAAATTTTCCAAAGTCTTGCTTACATGCACCAGCATGGATATTTTCACCGTGACCTGAAGCCAGAAAACTTGCTGGTCACCAAGGATGTTATTAAAGTTGCTGATTTTGGTCTAGCACGAGAGATCTGTTCACAACCACCCTATACTGAATATGTCTCCACACGATGGTATCGAGCTCCTGAAGTGCTGCTTCAGTCTTATCTCTATGGCGCTGAAGTTGATATGTGGGCAATGGGTGCTATAATGGCTGAACTCTTCACTCTCCGCCCTCTTTTTCCCGGTGCCAGTGAAGCTGATGAGATCTACAAAATATGTAGTGTGATTGGAAGTCCCACCATGGAGTCATGGGCTGGTGGACTTAAACTTGCAAGGGATATCAACTATCAGTTTCCACAGCTTGCTGGGGTTCATCTTTCTGTTCGAATCCCCTCTGCAAGTGCTGATGCTATCGACCTTATGACAGCACTTTGCTCATGGGATCCCAGCAAGAGGCCAACATCTGCTGAGGCCCTTCAACACCCATTCTTCCAGAGTTGCTTCTATATTCCTCCTTCCCTCCGCACCAAAGCAGTAGGCAGAACTCCTCCATCTGCTGGGGTGCAGGAATCAGTGGATCGGCATGAGGTTAAGAGATGTGGTGCTTTGTCTTATCAGAAGCCAACCAATAATTATTCTTCCACAAAATTACAACCTCCTTTAGCTGCAGGTGTGCAACGCAGACTGGATTGGACAAATGAGAAGGATGGGAATAAGACTGATAAAACCTTGAAGACTCTGAAACAACCAAAATATAGACCTCCCGGAAAGAACAGTCCAACATCTATGAACAAGGGAAGAACAGTACGTGGGGTTTCAGAAACAGCTGAGAAGTTTGCTAATATGAGTGTTGGAATCCGAAGACAGCCTATGGGACAAGCTCGAGCGCCCCCTCCAATGAGAGCCGGAGTCCAATGGGGTTCTGAATCTAAAAACTTGCTGCCGAGGCCTGCTCAAGTGGTTTCTACTGGAAGAACTTTTCCTAGGAAAGTTGCCGGATGA 1359 0.4437 MERYKLIKEVGNGTFGSVWRAINKQTGEVVAIKKMKKKYYSWEECVNLREVKSLRKMNHPNIVKLKEVIRECDILYFVFEYMEYNLYQLMKDRSKLFSEGQVRNWCFQIFQSLAYMHQHGYFHRDLKPENLLVTKDVIKVADFGLAREICSQPPYTEYVSTRWYRAPEVLLQSYLYGAEVDMWAMGAIMAELFTLRPLFPGASEADEIYKICSVIGSPTMESWAGGLKLARDINYQFPQLAGVHLSVRIPSASADAIDLMTALCSWDPSKRPTSAEALQHPFFQSCFYIPPSLRTKAVGRTPPSAGVQESVDRHEVKRCGALSYQKPTNNYSSTKLQPPLAAGVQRRLDWTNEKDGNKTDKTLKTLKQPKYRPPGKNSPTSMNKGRTVRGVSETAEKFANMSVGIRRQPMGQARAPPPMRAGVQWGSESKNLLPRPAQVVSTGRTFPRKVAG 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0894 452 Gene3D Phosphorylase Kinase; domain 1 1 83 - -
Lele50g0894 452 MobiDBLite consensus disorder prediction 409 452 - -
Lele50g0894 452 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 3 333 - -
Lele50g0894 452 SUPERFAMILY Protein kinase-like (PK-like) 1 287 IPR011009 -
Lele50g0894 452 CDD STKc_MAK_like 4 283 - -
Lele50g0894 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 121 133 IPR008271 GO:0004672|GO:0006468
Lele50g0894 452 Pfam Protein kinase domain 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0894 452 MobiDBLite consensus disorder prediction 350 367 - -
Lele50g0894 452 ProSiteProfiles Protein kinase domain profile. 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0894 452 MobiDBLite consensus disorder prediction 374 388 - -
Lele50g0894 452 FunFam serine/threonine-protein kinase MAK isoform X1 84 293 - -
Lele50g0894 452 MobiDBLite consensus disorder prediction 350 388 - -
Lele50g0894 452 FunFam cyclin-dependent kinase F-4-like 1 83 - -
Lele50g0894 452 ProSitePatterns Protein kinases ATP-binding region signature. 10 34 IPR017441 GO:0005524
Lele50g0894 452 SMART serkin_6 4 283 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0894 452 Gene3D Transferase(Phosphotransferase) domain 1 84 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0894 Lele-ChrLele50 5630816 5634281 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0894 1 290 Core Cell Cycle Gene Families AT3G48750 37.919 4.73e-68 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Lele50g0894 Pkinase 3.4e-73 CL0016