Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0893 ATGGATACTAAACCTAAGTCCGATCAGGTCGAGGGGGATGCTGCCCCAGGTGCCCTCGAAACTGGAAAGATCTCCAGCAGTGCAACAGCTTCACAGATTAGCAAGCTCAATAGTGATAGTGATAATAATTATAGTGCCTCTTTTGGTGATGGAGCTGGCTACTCTCAAAGTCCTACTTTTCTTCATCACACAAACCCTTTTGACATTGGAGATCGCTGTGTCATTGATGATGTCCACCCAATAAGCAATTTCTACAGGAGTACAGAGATGTGGGATTCTGGTGATTTCGTTGTTGATGTTTCAACACCTATGGAGACCATCGTTTCACTCAAGAAAGCAATTCAAATGTACATCGAGAGCAAGCCAAAGTATTATTGGAATCCAAAGCACGCAGTGATAGCGAAGGAGATAGAGAATGCGGATAAGCTGAAGTTGTGTCTGTGTGTTCAACACACAGTAAACCATCAGAACTATTGGGAGAGAAACAATCGGATCACAGAGCTTCTGTTGGAGCTGAAGAAGATCTTTGAGGTTCAAGGAGCTTTGTAA 549 0.4335 MDTKPKSDQVEGDAAPGALETGKISSSATASQISKLNSDSDNNYSASFGDGAGYSQSPTFLHHTNPFDIGDRCVIDDVHPISNFYRSTEMWDSGDFVVDVSTPMETIVSLKKAIQMYIESKPKYYWNPKHAVIAKEIENADKLKLCLCVQHTVNHQNYWERNNRITELLLELKKIFEVQGAL 182
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0893 182 MobiDBLite consensus disorder prediction 22 38 - -
Lele50g0893 182 PANTHER MECHANOSENSITIVE ION CHANNEL PROTEIN 5 80 177 IPR016688 -
Lele50g0893 182 MobiDBLite consensus disorder prediction 1 38 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0893 Lele-ChrLele50 5617069 5620575 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0893 56 177 Mechanosensitive Ion Channel Family AT5G12080 35.948 2.64e-25 100