Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0872 ATGCTTCCGTACCTCTTCATCCTTATAAAAGCAGTGCACAAGGATGTTGCAGAAAGAAGTGAAAAAACGCTCGTGCTCTCTTCCCATTTCTCTCTGAGTTTATTTCCTTCCGCTAGATTCTGTTTCCTTGTTTCCACAGGAAGAATCCGTTTAATCCTGGGGAGTACCGCTTCATCTTGCCGGTTATTCTTGCAGGGCAATTACCTCAGTGGAGCGATTCCAAGTGAACTAGGAAACCTGTCACAGCTCAGAAGTTTGGATATATCAAGTAACTCACTCAGTGGGAATATACCCCCATCACTTGGGAAACTGTATAATCTTAAAAATTTTAACGTTTCAACCAATTTTCTGGTCGGACCAATACCTTCTGATGGCGTGCTTGCTAACTTTAATGTAGACTCCTTTGTTGGTAATCGTGGTTTATGTGGAGCGCAAATCAATGTAATTTGTAAAGATGGTTCACCTACAAATCAATCCTCAACCTTGGATCCAAACCAAAATGGAAAGAAGAAATATTCTGGTCGATTGCTTATCAGTGCATCAGCAACAGTTGGTGCGCTTCTTTTAGTGGCACTCATGTGCTTCTGGGGTTGCTTTCTTTATAAGAAGTTTGGTAAAAATGACCGAAAAAGTCTGGCGATGGATGTTGGTGGAGGAGCTTCAATTGTAATGTTTCATGGAGATCTACCATATTCTTCAAAAGACATCATTAAGAAACTAGAGACTTTGAATGAGGAACACATAATTGGATGTGGAGGATTTGGTACAGTTTACAAGCTTGCAATGGATGACGGCAACCAATTTGCTTTGAAAAGGATTGTTAAGTTGAATGAGGGCTTTGATCGTTTTTTTGAGAGGGAACTTGAAATTCTTGGAAGCATAAAACACCGTTATCTAGTAAACTTGCGAGGATATTGCAATTCACCTACATCAAAGTTGTTAATATATGATTACCTACCTGGTGGAAGTCTTGACGAAGTTCTTCATGAAAAATCTGAGCAGCTAGACTGGGATTCACGCTTGAATATAATCATGGGAGCTGCGAAAGGGCTTGCCTACTTGCACCATGATTGTTCCCCGAGGGTCATACACCGTGACATTAAGTCAAGCAATATTTTACTTGATGGCAACCTGGATGCTCGAGTCTCTGATTTTGGGCTTGCCAAACTTCTGGAGGATGAAGAATCTCATATAACCACCATTGTTGCTGGAACGTTTGGATATCTAGCCCCAGAGTACATGCAAAGTGGTAGGGCAACTGAAAAAACTGATGTTTACAGTTTTGGTGTCTTGATACTTGAAGTGCTAAGTGGGAAGCGTCCAACAGATGCATCATTCATTGAAAAGGGTCTAAATATTGTTGGTTGGCTGAATTTTCTCATTACCGAAAATAGGCAAAGAGAGATTGTTGTTCCCTTATGTGAGGGAGTGCGAGTAGAGAGCCTGGATGCCTTGCTCTCAGTGGCTATTCAGTGTGTTTCTTCAAATCCAGAGGATCGGCCCTTGATGCATCGAGTAGTCCAGGTGCTCGAATCAGAGGTCATGACCCCATGCCCAAGTGATTTTTATGACTCTGAATAG 1581 0.4162 MLPYLFILIKAVHKDVAERSEKTLVLSSHFSLSLFPSARFCFLVSTGRIRLILGSTASSCRLFLQGNYLSGAIPSELGNLSQLRSLDISSNSLSGNIPPSLGKLYNLKNFNVSTNFLVGPIPSDGVLANFNVDSFVGNRGLCGAQINVICKDGSPTNQSSTLDPNQNGKKKYSGRLLISASATVGALLLVALMCFWGCFLYKKFGKNDRKSLAMDVGGGASIVMFHGDLPYSSKDIIKKLETLNEEHIIGCGGFGTVYKLAMDDGNQFALKRIVKLNEGFDRFFERELEILGSIKHRYLVNLRGYCNSPTSKLLIYDYLPGGSLDEVLHEKSEQLDWDSRLNIIMGAAKGLAYLHHDCSPRVIHRDIKSSNILLDGNLDARVSDFGLAKLLEDEESHITTIVAGTFGYLAPEYMQSGRATEKTDVYSFGVLILEVLSGKRPTDASFIEKGLNIVGWLNFLITENRQREIVVPLCEGVRVESLDALLSVAIQCVSSNPEDRPLMHRVVQVLESEVMTPCPSDFYDSE 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0872 526 ProSitePatterns Protein kinases ATP-binding region signature. 249 275 IPR017441 GO:0005524
Lele50g0872 526 SUPERFAMILY L domain-like 60 143 - -
Lele50g0872 526 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 53 511 - -
Lele50g0872 526 FunFam Leucine-rich repeat receptor-like protein kinase 59 152 - -
Lele50g0872 526 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 319 521 - -
Lele50g0872 526 Gene3D Phosphorylase Kinase; domain 1 218 318 - -
Lele50g0872 526 SUPERFAMILY Protein kinase-like (PK-like) 227 510 IPR011009 -
Lele50g0872 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 362 374 IPR008271 GO:0004672|GO:0006468
Lele50g0872 526 Pfam Protein kinase domain 245 508 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0872 526 Gene3D Transferase(Phosphotransferase) domain 1 319 517 - -
Lele50g0872 526 FunFam LRR receptor-like serine/threonine-protein kinase FEI 1 217 318 - -
Lele50g0872 526 ProSiteProfiles Protein kinase domain profile. 243 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0872 526 Gene3D Ribonuclease Inhibitor 23 158 IPR032675 -
Lele50g0872 526 SMART serkin_6 243 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0872 Lele-ChrLele50 5496648 5501547 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0872 53 519 Receptor kinase-like Gene Family AT2G35620 78.632 0.0 732
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XIIIa Lele50g0872 Pkinase 5.7e-46 CL0016