Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0868 ATGGTGTTTCTTCTGTGTTTGTTATCTGGCTGTAGCATCTGTTGGTTCAACACAGTATGTTTTGTTCTCTGCATTAGGAATTTCCCAGCGAATCGATCACTTGCATTATCCCTCACTGTGAGTTTCAATGGAGTTAGTGCAGCACTCTACACGCTTGCTGCAAATTCAATAAATCCCTCGTCCAGTGAATTGTATCTGCTCTTGAATGCCCTTGTTCCCCTTATCACTTCCTTTGCAGCACTAATCCCAATTCTTCGCCAACCAGCTTTAGACCCTCTTCCGCCTGATTCAGTTCACCGGGACTCATTGATCTTTCTGATATTGAACTTCTTAGCCGTTTTCACTGGCCTCTATCTTCTTCTCTTTGGCTCATCTGTTTCTGATGCAACTATAGCACGTCGCTACTTTGCTGGAGCTATATTCCTCCTTGTCTTCCCATTATGTATTCCTGGTACTGTCTACGCTCGAGATTGGTTCCGCCGTGCCATCCATTCTAGATTTCGGATGGAAGGCACAGGCTTCATACTTGTTCATGTTGATGATCTTGAGCTTCACAAGGAACTCCTCACCCATTCCGATAGCATTCATAGTCTCAACGATGGTGACTCTAAAAGTCTATTGTGTGAGAATGGATCCATGAATGGAAGTCTTACCGCAAAAGATAGTGATGGGAGTTGTGAGAGGATGATTGACAAGGATAAGTTGATAATGCTAGGTGAAGAACACCCAGCTTCAGTGGTTGTACGTAGGTTGGATTTTTGGCTTTATTATGTTGCATACTTCTGTGGAGGCACCATTGGTCTTGTCTACAGCAATAATATGGGACAAATTGCCCAATCTTTGGGCCTGAGTTCAAATGTATCCAACCTTGTCACTCTTTATTCATCATTCTCCTTCTTTGGCCGCTTGCTTTCAGCTGGACCAGACTATATTCGCAGTAAATTTTACTTTGCAAGGACTGGATGGCTAACTATTGGGCTTATACCAACCCCGATTGCGTTTTTCTTGCTTGCTGCATCAGACAGTGCTGTGGCACTCAATACAGGAACAGCACTAATTGGGTTGAGCTCTGGGTTCATTTTTGCAGCAGCCGTGTCAGTCACTTCTGACCTATTTGGGCCTAACTGTGTGAGCGTCAACCACAATCTCCTCGTAACAAATATCCCAATTGGATCTCTTCTCTATGGTTTTCTTGCAGCAGTTGTTTATGATACCAATGCACATCACTCAACAGTATCCGACATAGCAGTGTGCATGGGAAGGCAGTGTTACTTCTGGACATTTATGTGGTGGGGATTTATATCTCTCATTGGACTAGCTTCTAGTGTGTTATTATTCATAAGAACCAAGCACGCATATGATACTTTTGAAAACAAACGTATCTCAACACAATTAATTGTGTTTTAA 1407 0.4293 MVFLLCLLSGCSICWFNTVCFVLCIRNFPANRSLALSLTVSFNGVSAALYTLAANSINPSSSELYLLLNALVPLITSFAALIPILRQPALDPLPPDSVHRDSLIFLILNFLAVFTGLYLLLFGSSVSDATIARRYFAGAIFLLVFPLCIPGTVYARDWFRRAIHSRFRMEGTGFILVHVDDLELHKELLTHSDSIHSLNDGDSKSLLCENGSMNGSLTAKDSDGSCERMIDKDKLIMLGEEHPASVVVRRLDFWLYYVAYFCGGTIGLVYSNNMGQIAQSLGLSSNVSNLVTLYSSFSFFGRLLSAGPDYIRSKFYFARTGWLTIGLIPTPIAFFLLAASDSAVALNTGTALIGLSSGFIFAAAVSVTSDLFGPNCVSVNHNLLVTNIPIGSLLYGFLAAVVYDTNAHHSTVSDIAVCMGRQCYFWTFMWWGFISLIGLASSVLLFIRTKHAYDTFENKRISTQLIVF 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0868 468 SUPERFAMILY MFS general substrate transporter 242 451 IPR036259 -
Lele50g0868 468 Pfam Nodulin-like 1 150 IPR010658 -
Lele50g0868 468 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 3 454 - -
Lele50g0868 468 Gene3D MFS general substrate transporter like domains 253 461 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0868 Lele-ChrLele50 5474481 5476348 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0868 1 462 Nodulin-like Gene Family AT1G31470 56.317 2.18e-161 467
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0868 50 5474481 5476348 Lele50g0868 50 5474481 5476348 ECH
Lele50g0868 50 5474481 5476348 Lele51g0853 51 5231955 5236292 hybridization
Lele50g0868 50 5474481 5476348 Lele52g0853 52 5521369 5526449 hybridization