Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0864 ATGGAAGCATTGAGCCGGGCGGGGTTTATTTGTCCGGACGGACGAGTGTCGGTTCTTGGGTTCTCTGCATATGGCCTAAATAAATACGATTCTTTTTTGTTTCGTCTTCCTTCGTCGGACGGAAACTTCATTTCCTTTTTTAACTTTATCACTTCAATCACTCCAACTAGCTCCTTAAATTTGCTGAAATCAGCTCGTCACATTCCTCTTTCCCCATTCGAGCATTTTGTAGAGCGGTGTCCTCACCTCGGTTTCTTTCCCTCACTTCCCCTATTTCCGCTGCTTGGGCTTCTCATTCAGCATTTTCCATTCAGAATCTCCAGAATGGAGAGTGCAAGAATGAGCCAAGTTTTGAAATTGAATCTTGTGGTATTTCTATTGATATTGCTGAAAGCAGAAGGCTTCTTTGTACCAATCACTTATATTGAGGATGCGGTAGCGAAAGGAGCTGTTTGTTTGGATGGCAGTCCACCCGCTTACCACTTTGATAAGGGTTCTGGATCAGGGATTAACAACTGGCTCATACACATTGAGGGAGGAGGATGGTGCAACAATGTCACTACGTGCCTTTCGCGAAAGAGCACTCGCTTAGGTTCGTCTAAGAAAATGGCCAAGCAGGTTGCCTTCTCTGGAATGTTAAGCAACAAGGAAAAATTTAATCCAGAGTTCTACAATTGGAATAGAATCAAGGTTAGGTATTGTGATGGTGCATCATTCACTGGTGATGTGGAAGCAGTGGATTCAGACACAAATCTGCACTTCAGAGGTGCAAGAGTTTTTGTTGCGATCATTGAGGATTTACTGGCAAAAGGAATGAAAAATGCTGAAAATGCTGTTCTCTCTGGCTGTTCAGCTGGAGGATTGACTTCTATATTGCATTGTGATCGCTTTCGAGCTCTAATACCTGCGAGTGCTAAAGTGAAATGTTTTTCAGATGCTGGTTACTTCATTAATGCAAAGGATGTCTCAGGAGCACAACACATTGAACGATTCTACAGTCAAGTTGTTGAAACCCATGGTTCAGCAAAAAATTTACCTCGATCCTGCACTTCAAGACTCAGCCCGGGACTTTGCTTCTTCCCACAATATGTAATATCACAAATCACAACCCCAATTTTCTTTATAAATGCAGCCTATGACTCATGGCAGATAAAAAATATTTTGGCACCGGGTGTCGCTGATCCCCATGGCCGCTGGCATAGCTGCAAGCTTGATATAAACAACTGTTCACCCGATCAACTTACTGTAATGCAAGGTTTCAGGTTGGACTTTTTGAAGGCAGTGACCGTGCTGGGCAACATGCCGTCGAAAGGTATGTTTATCGACTCTTGCTATGCCCACTGCCAAACAGAAATGCAGGAAACATGGCTAAGAAGTGACTCTCCAGTGCTGCACAACAAAACAATTGCAAAAGCAGTAGGAGACTGGTACTATGATCGAAGTCCTTTCCATCAGATTGATTGCCCCTACCCTTGCAACCCCACTTGTCACAACCGTGTTTTCGAGCCAGACCACCCTTCATCAGTATAG 1530 0.4386 MEALSRAGFICPDGRVSVLGFSAYGLNKYDSFLFRLPSSDGNFISFFNFITSITPTSSLNLLKSARHIPLSPFEHFVERCPHLGFFPSLPLFPLLGLLIQHFPFRISRMESARMSQVLKLNLVVFLLILLKAEGFFVPITYIEDAVAKGAVCLDGSPPAYHFDKGSGSGINNWLIHIEGGGWCNNVTTCLSRKSTRLGSSKKMAKQVAFSGMLSNKEKFNPEFYNWNRIKVRYCDGASFTGDVEAVDSDTNLHFRGARVFVAIIEDLLAKGMKNAENAVLSGCSAGGLTSILHCDRFRALIPASAKVKCFSDAGYFINAKDVSGAQHIERFYSQVVETHGSAKNLPRSCTSRLSPGLCFFPQYVISQITTPIFFINAAYDSWQIKNILAPGVADPHGRWHSCKLDINNCSPDQLTVMQGFRLDFLKAVTVLGNMPSKGMFIDSCYAHCQTEMQETWLRSDSPVLHNKTIAKAVGDWYYDRSPFHQIDCPYPCNPTCHNRVFEPDHPSSV 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0864 509 Pfam Pectinacetylesterase 131 482 IPR004963 GO:0016787
Lele50g0864 509 SUPERFAMILY alpha/beta-Hydrolases 251 382 IPR029058 -
Lele50g0864 509 PANTHER NOTUM-RELATED 122 498 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0864 Lele-ChrLele50 5435966 5439709 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0864 127 506 Carbohydrate Esterase AT4G19420 64.183 0.0 582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0864 50 5435966 5439709 Lele50g0864 50 5435966 5439709 ECH
Lele50g0864 50 5435966 5439709 Lele52g0850 52 5494873 5498629 hybridization