Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0863 ATGTCCTTGTTAGGCACAATGGACTGGGCATTTGTGCATAAAACATGGGATAAGTGGGCTTCTACTAGCATTGGTTCTTCTGATCAACCTTTAAAAGCTGCTTTGCTGATAAATTATGATCCATATGGACCATCACGCCTATTGTCTACCATTGCTGAACAAGAAGGAATTACAGCCAATCCCATTGAATTGAATCACTTTGTTGACTACGTTAAGCGTAACAAACTCCAGACAGAAAGCTTCATTATTGGGCCCAATCAATACTTGGTCACATCAATTCATGAGAATTGGTTTAGTGCTAGGTGCATGAACACATCAAAGCCTGTTGGTGAAGGTGCAATTGTTTTGCAGACAGCAGCATATATTTTCGTTGCTCTGTATGAAGGTTCCATTGGTTCAGCATCTCGTGCTATGGCTGCTGCTGATCAGTTTGTTTGGCAATTGGGGCGTAAAAATCTTTAG 462 0.4113 MSLLGTMDWAFVHKTWDKWASTSIGSSDQPLKAALLINYDPYGPSRLLSTIAEQEGITANPIELNHFVDYVKRNKLQTESFIIGPNQYLVTSIHENWFSARCMNTSKPVGEGAIVLQTAAYIFVALYEGSIGSASRAMAAADQFVWQLGRKNL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0863 153 Pfam Profilin 15 145 IPR005455 GO:0003779
Lele50g0863 153 Gene3D Dynein light chain 2a, cytoplasmic 15 152 - -
Lele50g0863 153 PANTHER OS05G0241400 PROTEIN 7 153 - -
Lele50g0863 153 SUPERFAMILY Profilin (actin-binding protein) 16 148 IPR036140 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0863 Lele-ChrLele50 5431168 5433449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0863 6 153 Carbohydrate Esterase AT4G19410 66.443 5.50e-70 218