Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0820 ATGGATTCCGGCGTTCGTTTGTCTGTTGGAAAGTTTGAGAACGATGATGCTGATGTTGTGGAGAAAGATCCTACCGGACGTTACATTCGGTATGGTGATATGTTGGGGAGAGGAGCATTCAAGACTGTATATAAGGCATTTGATGAAGTTGATGGGATAGAAGTTGCCTGGAACCAAGTGAATATTGAGGACGTTTTGCAGTCTCCACATCAATTGGAAAGGTTATATTCTGAGGTTCATCTCCTAAAGTCATTGAAACATGAAAACATCATCAAGTTACATAATTCTTGGGTGGAAGATACAGACAAGACCATTAACATGATAACCGAGTTATTCATCTCTGGGAGTTTGAGACGATATCGAAGAGTGCATAAGAATGTTGAATTGAAGGCCATCAAGAACTGGGCAAGGCAAATTCTTCAAGGTTTATGCTATCTGCATAGCCACAATCCTCCAATTATCCATAGAGATTTGAAATGTGATAATATTTTTATTAATGGTAATACTGGAGAAATTAAGATTGGAGATCTTGGACTGGCAACTGTCCTACAGCAACCTACTGCACGGAGTGTCATTGGGACACCAGAGTTCATGGCTCCTGAGCTTTATGAAGAAGAGTATAATGAACTTGTTGACATATATTCTTTTGGCATGTGCATGTTAGAAATGATCACCTGCGAGTACCCATATAGCGAATGCAAAAATCATGCACAGACATATAAGAAAGTTACCTCTGGAATAAAGCCTGCTGCTCTTGGTAAAGTGAATGATTCACAAGTGAAGCAATTCATAGAGAAATGTTTAGTTCCAGCATCTAAGAGATTGCCTGCATCTGAGCTATTGAAGGATCCATTTCTTGCTACTGACAACATAAAGGAGATCAAACATTCACTGCAGTTGCCCAATCGCATGACAGAATTGGTGACACCACCAACAATTGAGCCACTTCCCATGGAGATAGACCAAACCATCAAGGATAATTTACCTGGCTCCTGTTTAGAAGTTACTGAAGAAACTCCTCAAATATTAACTCTAGATTTCCTTAGGAAGGATAAGGGTAATGAATTCAGGTTACGAGGGGAGAAAAATGCTTCAGACAGAACAATTTCACTCAACCTGCGCATTGTTGAGGCGAATGGTCACGCGAGGAATATCCACTTTCCGTTCTATCTTGATTCTGATACAGCCATTTCAGTTGCTGAGGAGATGGTTGAAAATCTGGATCTCACTGCCGAGGACTTGAGTTTTATTGCTGAACTAATACACACCATGACTACCAGGCTGGTTCCTAAATGGAGAGCGTCGGGTCAACAATCATCATCTGGAGCAGATTGTTTGGGTGGCCAATTTCATCTAGTTTTACATGGGGAGTCATCTTCAAGGTGCAGTGTAGAGGATCTTGTTAACTCACAGGTTCTTGATGAAGATCAAGAGAAACATGATTCAATTATGTCAGGCATTTCAGCGGAGGATGAGATTACGGTCGTCTCAGATGCTAAAAACTTTGATGGATTCTGTGAGGGCCCCATTGTCAAAAGGTCCAAGTCAGATGTCAGGTTATATGATGAAGATGAACGCGCTAAGGAAGTTAATGGCGGTGGATCTGTTAACAGCAATGGGTCTGATAGGAACTCAGTGAACGTCGTTTCAGATAACTCAACTGTCTCATTTATAGATTCATTTGGCGATGAGACCAAGAATTTTCACATGTCAAGCATCAATTCTCTTTCTCTTGCAGACAAGGATCAATGTGAGGAGCTGCAACTGGAGCTTGATGAAATAGATACACAGTTCCTCCAATGCTTTCTTGAACTTGCCAAGACGAGGGAGGATGCAATAGAAAACGCAAAAAGGAGATGGATTACAAGGAAGAAAATACCAGTGATGTGA 1890 0.4106 MDSGVRLSVGKFENDDADVVEKDPTGRYIRYGDMLGRGAFKTVYKAFDEVDGIEVAWNQVNIEDVLQSPHQLERLYSEVHLLKSLKHENIIKLHNSWVEDTDKTINMITELFISGSLRRYRRVHKNVELKAIKNWARQILQGLCYLHSHNPPIIHRDLKCDNIFINGNTGEIKIGDLGLATVLQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCMLEMITCEYPYSECKNHAQTYKKVTSGIKPAALGKVNDSQVKQFIEKCLVPASKRLPASELLKDPFLATDNIKEIKHSLQLPNRMTELVTPPTIEPLPMEIDQTIKDNLPGSCLEVTEETPQILTLDFLRKDKGNEFRLRGEKNASDRTISLNLRIVEANGHARNIHFPFYLDSDTAISVAEEMVENLDLTAEDLSFIAELIHTMTTRLVPKWRASGQQSSSGADCLGGQFHLVLHGESSSRCSVEDLVNSQVLDEDQEKHDSIMSGISAEDEITVVSDAKNFDGFCEGPIVKRSKSDVRLYDEDERAKEVNGGGSVNSNGSDRNSVNVVSDNSTVSFIDSFGDETKNFHMSSINSLSLADKDQCEELQLELDEIDTQFLQCFLELAKTREDAIENAKRRWITRKKIPVM 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0820 629 Gene3D Phosphorylase Kinase; domain 1 13 110 - -
Lele50g0820 629 ProSiteProfiles Protein kinase domain profile. 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0820 629 SMART serkin_6 29 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0820 629 MobiDBLite consensus disorder prediction 532 546 - -
Lele50g0820 629 FunFam probable serine/threonine-protein kinase WNK9 112 291 - -
Lele50g0820 629 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 14 526 - -
Lele50g0820 629 Gene3D Transferase(Phosphotransferase) domain 1 113 294 - -
Lele50g0820 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 153 165 IPR008271 GO:0004672|GO:0006468
Lele50g0820 629 FunFam Probable serine/threonine-protein kinase WNK1 14 110 - -
Lele50g0820 629 MobiDBLite consensus disorder prediction 526 546 - -
Lele50g0820 629 SUPERFAMILY Protein kinase-like (PK-like) 24 306 IPR011009 -
Lele50g0820 629 CDD STKc_WNK 27 286 - -
Lele50g0820 629 Pfam Protein kinase domain 33 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0820 629 Gene3D - 367 444 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0820 Lele-ChrLele50 5065980 5068591 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0820 15 628 MAP Kinase Kinase Kinase AT5G41990 53.398 0.0 583
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Lele50g0820 Pkinase 5.1e-52 CL0016