Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0818 ATGGTTGACACTCAGATGGGTTCTTCTTCGCTTTGGAATAGTCTCAAATGTCTTTGTTCTGCTCATGGTTGGTCTTACGCCATTTTCTGGCGCTCTCATCCTCCTAATTCCTTGTTCCTGTCTCTGGAAGATGCTTACTACGAAGGGAAAATAGGACAAGAAGTTACTAAGACGATTCCACAGCTTCATTTCCTGGATTCTCAAACCCAGGAATGGAATCTAACAGGTGTCTTTGGAGATCATTGTGAGCTTGATTCTGACTTGCGTCAACAATTCTCCTCTGGGATCAAGACAATTGCTGTGATATCTGTTAAACCATTGGGAGTAGTACAATTTGGATCCACACAGAAGATCTTGGAAAGAGAGGAAATTCTGGAACAGACACAAAGATTGTTCATGGAGACTGACAGTTTGGATACAGTTGAGGCACCAGAAAAAATGGTTTTACCTTGGGATTTTGAAAATTATGATCTGAATGGATTGTTGGCCTCTGATGAAAACTTGTGTTCTTGGAATCTCAACCCTGAATATGACAATAACATCAATAAGGGAATGGCAAATGCTTGTTGTTTTTCAACAAGCATGGATAATTCTCTCCTTTCTACTTGTAAGAATCAGGAAGATGGAATCATCACCAGCTTGCATGGCGAATCTTCTTGTCTTAGCGATCAATTGACTAACAGTTTTGAGGTTCTTTTGAATCCTAACACTTATGTGAAAAACCCATTATGTTTTGGCTCACAGAGCAGTGAAGTTTCTTTGGCTTCATCAATGGCTCAAGATTTTACTGCTGAGGATTCCGTTTTGACCTCTTTGTACAGCATGAACACAAGCATGCTTGAATCAGGAGGGTCATTTCAAGACAAATTCGGGATCAATTCTCTGGAATACAAGCCTTTTGCTCAATCACTACATGGACTGTCAAAGATGTCGACCGAAGATTTATCCGAGTTGTGCTCTGTGGATGATCTTTGTCAGAAGTTTGCTTCTTCTCCAGAACATAGCACCTGTGCAACAAACACTGCATTTGAAAATTCTCTTTCTCAATCCATAAAACTCAATTCCACTTGTGCTGCCTTATTAAGTGATGATCCACTCAAAATTCTCTCAGATGGACACCAAACATCTACCTTAATGCATGCTTTTGGTGGTGAGTGCTGGGGGAATATGAATATGATTGCACCAATGGTGAAATCTGCAACCAATACTGCTTCATCTGAATGCAAATCAGAGTTGAATACTGTTACACCTAATGGCACCAAGAAGGGATTATTTGCAGAGCTTGGCATTGAAGAGTTTTTGAATGGTGGATCCAGTAGTCTTGAGGATCAAATTTCTACCACTAAAAGGCGTAGGACAGATTCTTCATCTGGGAGTACTAATCCTGTTTCAAACTTGGACAAGACAAACAATCTTGTACACAAGAAAGACATATTTCCTAATTCAGTGGTAGGGTCATGGATGGACCATAGTCATTACCTCGATGCTGGTAAGGTTGTCCCTCAAAAGCCAGAGGAATCCACAAAGGTTTCTAGGAAGAGGGCTAGGCCTGGAGAGAGTACTCGACCCCGACCGAAAGATCGCCAGCAGATCCAAGACCGTATTAAAGAGTTGAGAGGAATCATACCCAGTGGTGGAAAGTGTAGCATTGACTCTTTGTTGGATCGCACCATCAAATACATGGTTTTCTTACAAAGCGTCTCAAAATATGCAGACAAGCTGCAAGAACCCAAAAGTCCTAAGCTCATAGAGGAGGCAAACAATATGGTTGCAAAAAGCAAAAGTGTGGGAGAATCTGATATCAAGGGTGGTGGTGGTGGTGTTACATGGGCATTTGAAGTTGCAGGTCAAAAAATGGCATGCCCAATTATAGTGGAGGACATGAACCAACCAGGCCTAATGCTCATAGAGATGCTTTGTGAGGAGCAGGGCTTTTTCCTCGAGATAGCCGAAATAATCCGCGGATTTGGACTGAATATTCTGAAAGGGAAGATGGAAATCAGGGACAAGAAGTTATGGGGACGCTTCATTGTTGAGGCAAGCAGACATGTAACGAGGATTGATGTATTCTGGTATCTGGTTCAGCTTCTACCTCAGACGAGTGCTTCTTCTGGAATGGATAATTATCAGAACACAGATATGGCACTTCCTCCTGTGGCCATGACGTGA 2169 0.4195 MVDTQMGSSSLWNSLKCLCSAHGWSYAIFWRSHPPNSLFLSLEDAYYEGKIGQEVTKTIPQLHFLDSQTQEWNLTGVFGDHCELDSDLRQQFSSGIKTIAVISVKPLGVVQFGSTQKILEREEILEQTQRLFMETDSLDTVEAPEKMVLPWDFENYDLNGLLASDENLCSWNLNPEYDNNINKGMANACCFSTSMDNSLLSTCKNQEDGIITSLHGESSCLSDQLTNSFEVLLNPNTYVKNPLCFGSQSSEVSLASSMAQDFTAEDSVLTSLYSMNTSMLESGGSFQDKFGINSLEYKPFAQSLHGLSKMSTEDLSELCSVDDLCQKFASSPEHSTCATNTAFENSLSQSIKLNSTCAALLSDDPLKILSDGHQTSTLMHAFGGECWGNMNMIAPMVKSATNTASSECKSELNTVTPNGTKKGLFAELGIEEFLNGGSSSLEDQISTTKRRRTDSSSGSTNPVSNLDKTNNLVHKKDIFPNSVVGSWMDHSHYLDAGKVVPQKPEESTKVSRKRARPGESTRPRPKDRQQIQDRIKELRGIIPSGGKCSIDSLLDRTIKYMVFLQSVSKYADKLQEPKSPKLIEEANNMVAKSKSVGESDIKGGGGGVTWAFEVAGQKMACPIIVEDMNQPGLMLIEMLCEEQGFFLEIAEIIRGFGLNILKGKMEIRDKKLWGRFIVEASRHVTRIDVFWYLVQLLPQTSASSGMDNYQNTDMALPPVAMT 722
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0818 722 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 13 54 IPR025610 -
Lele50g0818 722 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 89 132 IPR025610 -
Lele50g0818 722 MobiDBLite consensus disorder prediction 451 469 - -
Lele50g0818 722 MobiDBLite consensus disorder prediction 498 531 - -
Lele50g0818 722 MobiDBLite consensus disorder prediction 505 531 - -
Lele50g0818 722 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 515 564 IPR011598 GO:0046983
Lele50g0818 722 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 10 711 IPR043561 GO:0003700|GO:0006355
Lele50g0818 722 MobiDBLite consensus disorder prediction 437 469 - -
Lele50g0818 722 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 528 570 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0818 Lele-ChrLele50 5054293 5057506 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0818 474 717 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 49.416 6.10e-69 236