Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0816 ATGGTTCTCGGAACCCATGCGCTTGTATCGGGGAAAAAGAATCTTGCCCTTAAAGCTGCTCCTTCAAGCATCGCAGGTTGCCAACAATGGCGAACTCTATTCCTTTTTCTTGTTTTCTACAAATTATGTTTTCAACTTCATCTACTATGCTGCTCATTATTAATCTCTATGGCTGTCACAGAATCTTCATCTGCTTCCCCTTTGGACCCAGGCCTTATGAAGCCCTCAATCCCTCTTGTCTCCTTTCTCGAACGCCTCCAAGAAACAGCAGTTAACACCTTTGGCAGATCTAACGTTGACCCAAAAACCTACGTTGACGTATCGTTGAAGTTCAACTTGTTTGAGACGGAGGAGGCATTTGATAAGCTTGCTAGGTCTGCTAATGGCTCTGTACCCGCCAAGGAGTTGAATGATTTTATAGAAAGATACTTGAATGGTGCAGAGGACGATATGGAGTACTGCGAACCAGAGGATTACGTAGAAGAGCCAGAGGGATTCTTGCCCAAAGTTGAGCATCCAGAAGTGAGGGCATGGGCATTGAAGGTCCATGCCCTTTGGAAAAACTTGAGTCGCAGAGTATCAAGTGGGGTCAAAAGCCATCCCCATTTGCATACTCTTCTTCCTCTTCCTGCTTCTTTCGTCATTCCTGGCTCACGCTTTCGTGAGGTTTATTACTGGGATTCCTACTGGATAATCAGGGGCTTACTGGTGAGTAAAATGTACAAGACAGCCACAGGAATGGTGATTAATCTTATTTCTTTGGTAGAAGAATATGGATTTGTGCCTAATGGTGCAAGAACTTACTACGCCAACAGGAGCCAGCCTCCCCTTTTAAGTGCTATGATTTATGAGATCTACAATGCCACTGGTGACATGGAGCTGGTCAAAAGATCGCTTCCTGCACTAAGGAAAGAGTATGATTTTTGGAATTCAGATATGCATAGGGTGACCATTGTGGATCCTCAAGGTTGCACTCACACCTTAAATCGTTACTATGCAATGTGGAATAAACCCAGGCCAGAGGGTTCAGTAAAGGACAAGGGATTTTCTTCCAAGTTTTTGGATGTTTCAGAAAAGCAACACTTTTACCATGAAGTGACTTCAATTTGTGAATCAGGATGGGATTTCAGCACAAGATGGATGAGAGATCCGTTAGAATTTACATCAGTGGCTGCAACTGCTGTAATACCTGTTGATCTAAATGCATTTATTCTTGGGATGGAACTTAATATTGCATTTTTGGCACAAGTTGCTGGAGATAATAGCACTGCTCAACAGTTCCTGCAGCTTTCTGATAGTAGAAAGAAGGCGCTCAACTCTGTTTTCTGGAACGCGAACATGAAACAATGGCTTGATTACTGGCTCACAAATAGTACATGCCAGGGTATTCATGTCTGGGAAGATCAGCAGCAGAATCGCAATGTATTTGCTTCCAACTTTGTTCCTTTATGGATGGAACCATTTTACTCAGATTCTTCGATTGCGAGTAGCGTCGTTGAAAGTCTCAAAACTTGTGGGCTGATTCGTGCTGCTGGAATTGCAACCTCTTTGACGAATTCGGGACAACAATGGGACTTCCCAAATGGCTGGCCCCAAATTCAACATATGATTGTTGAAGGGCTGGTGAAATCTGGTTTGAAAGAAGCAGTTTCAGTGGGGGAAGAAATTGCAAGGAGATGGATCACAACCAACTATATCGCCTACAAGAAAACAGGGATGATGCATGAAAAATATAATGTGGAGCATTGTGGAGAGTTTGGAGGTGGTGGATTATACGAGCCCCAGACTGGTTTTGGGTGGTCGAATGCCGTGGTGCTTGCTTTCTTGGAGAAGTTTGGATGGCCTCAAGATCGCGATATTGGTTGTTCATCGGTTTCCTCAGAACCTGACAACATTGGCAATTGA 1905 0.4378 MVLGTHALVSGKKNLALKAAPSSIAGCQQWRTLFLFLVFYKLCFQLHLLCCSLLISMAVTESSSASPLDPGLMKPSIPLVSFLERLQETAVNTFGRSNVDPKTYVDVSLKFNLFETEEAFDKLARSANGSVPAKELNDFIERYLNGAEDDMEYCEPEDYVEEPEGFLPKVEHPEVRAWALKVHALWKNLSRRVSSGVKSHPHLHTLLPLPASFVIPGSRFREVYYWDSYWIIRGLLVSKMYKTATGMVINLISLVEEYGFVPNGARTYYANRSQPPLLSAMIYEIYNATGDMELVKRSLPALRKEYDFWNSDMHRVTIVDPQGCTHTLNRYYAMWNKPRPEGSVKDKGFSSKFLDVSEKQHFYHEVTSICESGWDFSTRWMRDPLEFTSVAATAVIPVDLNAFILGMELNIAFLAQVAGDNSTAQQFLQLSDSRKKALNSVFWNANMKQWLDYWLTNSTCQGIHVWEDQQQNRNVFASNFVPLWMEPFYSDSSIASSVVESLKTCGLIRAAGIATSLTNSGQQWDFPNGWPQIQHMIVEGLVKSGLKEAVSVGEEIARRWITTNYIAYKKTGMMHEKYNVEHCGEFGGGGLYEPQTGFGWSNAVVLAFLEKFGWPQDRDIGCSSVSSEPDNIGN 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0816 634 Pfam Trehalase 99 613 IPR001661 GO:0004555|GO:0005991
Lele50g0816 634 SUPERFAMILY Six-hairpin glycosidases 94 615 IPR008928 GO:0005975
Lele50g0816 634 Gene3D - 86 622 IPR012341 GO:0005975
Lele50g0816 634 PRINTS Glycosyl hydrolase family 37 signature 328 345 IPR001661 GO:0004555|GO:0005991
Lele50g0816 634 PRINTS Glycosyl hydrolase family 37 signature 395 412 IPR001661 GO:0004555|GO:0005991
Lele50g0816 634 PRINTS Glycosyl hydrolase family 37 signature 258 276 IPR001661 GO:0004555|GO:0005991
Lele50g0816 634 PRINTS Glycosyl hydrolase family 37 signature 363 380 IPR001661 GO:0004555|GO:0005991
Lele50g0816 634 PRINTS Glycosyl hydrolase family 37 signature 596 609 IPR001661 GO:0004555|GO:0005991
Lele50g0816 634 PRINTS Glycosyl hydrolase family 37 signature 516 532 IPR001661 GO:0004555|GO:0005991
Lele50g0816 634 PRINTS Glycosyl hydrolase family 37 signature 438 454 IPR001661 GO:0004555|GO:0005991
Lele50g0816 634 PANTHER TREHALASE 77 625 IPR001661 GO:0004555|GO:0005991
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0816 Lele-ChrLele50 5034478 5039474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0816 64 620 Trehalose Biosynthesis Gene Families AT4G24040 54.545 0.0 625