Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0815 ATGAGCCAAAGGTTGCGCCCAACCATGGCAGACTTTCTGTTCTTTTTTCACAGACAAAATTTTCCACTTCATTTACTATTCTCACTAACAATCATTGTGGCTTTCGTAGAATCTTCACCCGCTTGTTCTTTGGACCCAGCCCTCGTGAAGCCCTCAACCCCACTTGTCTCCTTCCTCGAACGTCTACAGGAAACGGCTTTAGCCACTTTGGCCAAATCTAAATTCGATCCAAAAACATATGTGGACTTGCCCTTGAAGTTCAACTTGTCTGAGACAGAGGAGGCATTTGATAAGCTTGCTAGTTCTGTGAATGGCTCTGTACCAGTCGATGAGTTGAATGGTTTTATAGAAAGATACTTTGATGGTGCAGGGGACGATGTGGTGTACTACGAACCAGATGATTACGTAGATGAGCCAGAAGGATTCTTGCCCAAAGTTGAGCATCCAGAGGTGAGGGCATGGGCATTGAAGGTCCATTCCCTTTGGAAAAACTTGAGTCGCAGAGTATCAAATGGGGTCAAAAGCCATCCCCATTTGCATACGCTTCTTCCTCTCCCTGCTTCTTTCGTCATTCCTGGTTCACGCTTTCGCGAGGTTTATTATTGGGATTCCTACTGGGTGATCAAGGGCTTACTGGTGAGTAAAATGTGCAAGACAGCCACGGCAGTTGTGACCAATCTTATTTCTTTCATAGAGGAATATGGATTTGTGCTTAATGGTGCAAGAGCCTACTACACCAACAGAAGCCAACCTCCCCTTTTAAGTTCTATGATGTATGAGATTTACAACAGAACTGGTGATATAGAATTGGTCAAAAGATCGCTTCCTGCGCTGAGGAAAGAATATGAATTTTGGAATTCAGACATACATAGGGTGACCATTGTGGATACGCAAGGTTGGGCTCACACCTTAAATCGTTATTATGCAATGTGGAATAAACCTAGGCCAGAGTCTTCAATAAACGACAAGGCACTTGCTTCCAAGCTTTTGAATGTTTCAGAAAAACAGCACTTTTACCGTCAGGTGGCTTCAGCTGCTGAATCAGGATGGGATTTTAGTACAAGATGGATGAGAGATCCGTCAGATTTTACCACATTGGCTACAACAGCAGTAATACCTGTTGATCTAAATGCTTATATACTTGGGATGGAACTTAATATTGCATTTTTCGCTGTAGTTACTGGAGATAATAGTACGGCTCAGTACTTCCTGCAACTAGCTGATAATAGAAAGAAGGCATTCAACTCAGTTTTTTGGAACAAAAACATGAATCAATGGCTTGATTTCTGGCTCGCAAATAGGACATGTCAGGAAGCTCAAGTCTGGGATGCTCACCAGCAGAATCAAAATATATTTGCTTCTAATTTTGTTCCTCTGTGGGTGGAACCATTTTACTCAGACTCTTCGGTTGTGGGTGGCGTTGTTGAAAGCCTCAAAACTAGTGGGCTACTCCATGCTGCTGGAATTGCAACCTCTTTGACGAATTCTGGACAACAGTGGGACTTCCCAAATGGCTGGGCCCCACTTCAACATATAATAGTAGAAGGTCTGGTGAAATCTGGGTTGAAAGAAGCAGCTTCATTAGCGGAAGAAATTGCAAGGAGATGGATCACAACCAACTATGTCGCCCATAAGAAATCGGGGGTGATGCATGAAAAATATGATGTGGAGCATTGTGGAGATTTTGGGGGTGGTGGGGAATATGTACCTCAGACTGGTTTTGGGTGGTCGAACGGAGTGGTGCTTACTCTCTTGGAGGAGTTTGGATGGCCTCAGCACCTCAATATTGACTGTTCATAG 1800 0.4372 MSQRLRPTMADFLFFFHRQNFPLHLLFSLTIIVAFVESSPACSLDPALVKPSTPLVSFLERLQETALATLAKSKFDPKTYVDLPLKFNLSETEEAFDKLASSVNGSVPVDELNGFIERYFDGAGDDVVYYEPDDYVDEPEGFLPKVEHPEVRAWALKVHSLWKNLSRRVSNGVKSHPHLHTLLPLPASFVIPGSRFREVYYWDSYWVIKGLLVSKMCKTATAVVTNLISFIEEYGFVLNGARAYYTNRSQPPLLSSMMYEIYNRTGDIELVKRSLPALRKEYEFWNSDIHRVTIVDTQGWAHTLNRYYAMWNKPRPESSINDKALASKLLNVSEKQHFYRQVASAAESGWDFSTRWMRDPSDFTTLATTAVIPVDLNAYILGMELNIAFFAVVTGDNSTAQYFLQLADNRKKAFNSVFWNKNMNQWLDFWLANRTCQEAQVWDAHQQNQNIFASNFVPLWVEPFYSDSSVVGGVVESLKTSGLLHAAGIATSLTNSGQQWDFPNGWAPLQHIIVEGLVKSGLKEAASLAEEIARRWITTNYVAHKKSGVMHEKYDVEHCGDFGGGGEYVPQTGFGWSNGVVLTLLEEFGWPQHLNIDCS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0815 599 ProSitePatterns Trehalase signature 2. 499 508 IPR018232 GO:0004555|GO:0005991
Lele50g0815 599 Pfam Trehalase 75 589 IPR001661 GO:0004555|GO:0005991
Lele50g0815 599 PRINTS Glycosyl hydrolase family 37 signature 339 356 IPR001661 GO:0004555|GO:0005991
Lele50g0815 599 PRINTS Glycosyl hydrolase family 37 signature 304 321 IPR001661 GO:0004555|GO:0005991
Lele50g0815 599 PRINTS Glycosyl hydrolase family 37 signature 492 508 IPR001661 GO:0004555|GO:0005991
Lele50g0815 599 PRINTS Glycosyl hydrolase family 37 signature 234 252 IPR001661 GO:0004555|GO:0005991
Lele50g0815 599 PRINTS Glycosyl hydrolase family 37 signature 572 585 IPR001661 GO:0004555|GO:0005991
Lele50g0815 599 PRINTS Glycosyl hydrolase family 37 signature 414 430 IPR001661 GO:0004555|GO:0005991
Lele50g0815 599 PRINTS Glycosyl hydrolase family 37 signature 371 388 IPR001661 GO:0004555|GO:0005991
Lele50g0815 599 PANTHER TREHALASE 52 596 IPR001661 GO:0004555|GO:0005991
Lele50g0815 599 Gene3D - 60 596 IPR012341 GO:0005975
Lele50g0815 599 SUPERFAMILY Six-hairpin glycosidases 71 591 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0815 Lele-ChrLele50 5029676 5033503 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0815 45 598 Trehalose Biosynthesis Gene Families AT4G24040 58.781 0.0 670
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0815 50 5029676 5033503 Lele50g0815 50 5029676 5033503 ECH
Lele50g0815 50 5029676 5033503 Lele51g0801 51 4833509 4837338 hybridization
Lele50g0815 50 5029676 5033503 Lele52g0803 52 5090540 5094870 hybridization