Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0806 ATGAGGAAGAAGATGGTGATGAGTAAGTTGAGTGAAGTAGGCATCACAATGAGTGCCCCTCAAACCCCAACCATATCCCCAAATCTGTATCCACAAGAACTTCAGTTAAAACTATACCAGGCCTTCTTTTTCTCAATTCCAATCCTATTTTCAATCATTCTGTTTCTCTTGTTTTATTTGTTCTACCTCAAGCGCAGGGCTTCTCTCACTTCCCCTCCTCACTCTCTTCCTACTACTGCACCTTCAACTACCTCTCATTCCACTCCTTGTCGTTTGGATCTCACGCTTCAGTTCCTTGACACTCTTCCGAAAGTTCAATTTGATGAAGAATTGGAAGCAAGAGATTCACAATGTTGTATATGTCTGGGCGAGTTTGAGATGAAAGAAGAAGTATTGCAGATTCCTGAGTGCAAGCATGTGTTTCACAGAGAATGCATTTACCACTGGCTTCATTCACACACCACTTGTCCATTGTGTAGATGTTGTATCATCCCTCCCACCAAGTTTCTGAACCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTCCTGCAGATGAAGCTGCTGCTGCTTCTTCAATCTAA 588 0.4422 MRKKMVMSKLSEVGITMSAPQTPTISPNLYPQELQLKLYQAFFFSIPILFSIILFLLFYLFYLKRRASLTSPPHSLPTTAPSTTSHSTPCRLDLTLQFLDTLPKVQFDEELEARDSQCCICLGEFEMKEEVLQIPECKHVFHRECIYHWLHSHTTCPLCRCCIIPPTKFLNPPPPPPPPPPPPPPADEAAAASSI 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0806 195 MobiDBLite consensus disorder prediction 172 188 - -
Lele50g0806 195 MobiDBLite consensus disorder prediction 172 195 - -
Lele50g0806 195 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 83 165 IPR013083 -
Lele50g0806 195 ProSiteProfiles Zinc finger RING-type profile. 118 160 IPR001841 -
Lele50g0806 195 Pfam Ring finger domain 117 160 IPR001841 -
Lele50g0806 195 SMART ring_2 118 159 IPR001841 -
Lele50g0806 195 SUPERFAMILY RING/U-box 96 171 - -
Lele50g0806 195 PANTHER E3 UBIQUITIN-PROTEIN LIGASE ATL42 25 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0806 Lele-ChrLele50 4959511 4961148 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0806 24 165 C3H Transcription Factor Family AT4G10150 40.000 9.20e-36 123