Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0805 ATGCAATCCGATATTACCCAACTCGGAGTTATGGCTGAAAACAATAGGAGTGACAATTCTGGCATGTGGCATAACAGTCAAGGTGAAATGAATAGTAAAAGCAGCAGCAACACTCTTTCAAGAAATCAAACAGAAGGGAGTTGGCTATCTTCTCCCCACTCAACCGGTCCTCCGCAACTGTTGCAGGACTCCACAGATGATGGCAAGAGCGTCTCTGCTTGGCCTGTTCACTCAGTCCATTCAACACCTTACTCCACGCGACTGAACAATGATCATGTGCTTGAACAAGCTGGCAAGGAGAATAAAGTTGAGATTGCTACAAGCTGTCGATTGTTTGGGATTGAGCTTATCCATCCCCAAAATTCAACTATGGAGAAGACGCCTGCACATGCAGCTGGTATGCTTACTGGCCCTTCTGAAAGTCATGTCAATGCGTTGCCTGGAACTGATTCAGATCGTAAGTATAACATAAACCCTGATGCTTTCACTGGTATTGCAAACCTGCAAAAGGTTCAAATGCAGGGGGTTGCGGTGGGTCGTGCTGTGGACTTGGGCATGTTGGATGGTTATGATCAGCTTATAGTTGAGTTGGAGGAGATGTTTGACATAAAAGGACAAATTAAAGATAGGAAGAAATGGGAAATTGTCTTCACTGATGATGAAGGGGATATGATGCTTGTGGGGGATGATCCATGGCCTGAATTCTGTAATATGGTCAGAAGAATCTTCATTTGTTCCATCCAGGATGTGAAGAAGATGAGTACGGGAAGCAAATTGCCTATTTCATCAATGGAAGGTGATGGGACTGTAATAAATGGGAGCACAGCTGAAACCTGA 837 0.4444 MQSDITQLGVMAENNRSDNSGMWHNSQGEMNSKSSSNTLSRNQTEGSWLSSPHSTGPPQLLQDSTDDGKSVSAWPVHSVHSTPYSTRLNNDHVLEQAGKENKVEIATSCRLFGIELIHPQNSTMEKTPAHAAGMLTGPSESHVNALPGTDSDRKYNINPDAFTGIANLQKVQMQGVAVGRAVDLGMLDGYDQLIVELEEMFDIKGQIKDRKKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFICSIQDVKKMSTGSKLPISSMEGDGTVINGSTAET 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0805 278 ProSiteProfiles PB1 domain profile. 166 247 IPR000270 GO:0005515
Lele50g0805 278 Pfam AUX/IAA family 163 245 IPR033389 -
Lele50g0805 278 FunFam Auxin response factor 163 254 - -
Lele50g0805 278 Gene3D - 163 254 - -
Lele50g0805 278 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 26 254 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele50g0805 278 SUPERFAMILY CAD & PB1 domains 167 242 - -
Lele50g0805 278 MobiDBLite consensus disorder prediction 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0805 Lele-ChrLele50 4955039 4956121 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0805 20 259 B3 DNA Binding Superfamily AT4G23980 36.604 1.18e-42 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Lele50g0805 AUX_IAA 2.5e-11 CL0072