Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0804 ATGTCTTTGGTTGAAGGTGGTTGTGGAGGGGATGATCTGTATGAAGAACTATGGAGGGCCTGTGCAGGACCTCTAGTCGACGTTCCTCGAGCCGGCGAGAGGGTGTTCTATTTTCCACAAGGACACATGGAGCAATTGGAGGCATCAACAAATCAAGAACTTAATCATACAATTCCGGTGTTCAACCTTCCATCAAAGATCCTTTGTCGCGTGGTGAACGTCCATCTACTGGCTGAACAAGAAACTGACGAGGTTTACGCCCAAATTACGCTGGTGCCAGAATCCAATCCTACTAGCCCAGATCCAAGCCCTGCTGAACTTCCAAGGCCAGCAGTTCATTCATTCAACAAGGTTTTGACGGCATCTGATACGAGCACCCATGGTGGATTCTCTGTTCTCAGAAAACACGCCACTGTATGCCTTCCTTCTCTGGACATGTCCCAACCAACTCCTACTCAGGAATTGGTTGCCAAAGATCTTCACGGTTACGAGTGGCGCTTTAAGCATATATTCAGAGGGGTCAATGGAGAATTACGTGTTGGAGTTAGGCGTCATGCTCGTCAGCAGAGTAGCATGCCATCATCCGTAATTTCCAGTCAGAGTATGCACCTAGGAGTTCTTGCAACTGCCTCTCATGCCGTTGCCACCCAAACTCTTTTTGTTGTTTACTATAAACCAAGGACAAGTCAATTCATCATAAGCGTAAACAAGTATTTGGAAGCTATTGACAATAAGTTCACAGTTGGTATGAGGTTCAAGATGAGGTTTGAAGGGGATGAGTCTCCTGAAACTGATAAGAGATTTTCGGGCACCATTATTGGGGAGGAAGATATTTCTCCTCACTGGGTAAATTCGAGCTGGCGATCACTCAAGGTTCAGTGGGATGAACCTGCAGCTGTTCCAAGACCAGATAAGGTTTCACCATGGGAAGTGGAACCTTTTCTTGCTCCCGTCATTTCATCTTCGGTTCAACCTCCCGTTGTAAAGACTAAGAGACCTCGACCACCCAGTGAAATTCCAGATTTTGGTGAGAAATGA 1038 0.4644 MSLVEGGCGGDDLYEELWRACAGPLVDVPRAGERVFYFPQGHMEQLEASTNQELNHTIPVFNLPSKILCRVVNVHLLAEQETDEVYAQITLVPESNPTSPDPSPAELPRPAVHSFNKVLTASDTSTHGGFSVLRKHATVCLPSLDMSQPTPTQELVAKDLHGYEWRFKHIFRGVNGELRVGVRRHARQQSSMPSSVISSQSMHLGVLATASHAVATQTLFVVYYKPRTSQFIISVNKYLEAIDNKFTVGMRFKMRFEGDESPETDKRFSGTIIGEEDISPHWVNSSWRSLKVQWDEPAAVPRPDKVSPWEVEPFLAPVISSSVQPPVVKTKRPRPPSEIPDFGEK 345
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0804 345 CDD B3_DNA 113 181 IPR003340 GO:0003677
Lele50g0804 345 Gene3D - 245 317 - -
Lele50g0804 345 MobiDBLite consensus disorder prediction 324 345 - -
Lele50g0804 345 Pfam Auxin response factor 210 291 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Lele50g0804 345 SUPERFAMILY DNA-binding pseudobarrel domain 106 213 IPR015300 -
Lele50g0804 345 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 12 173 IPR044835 GO:0003677|GO:0006355|GO:0009725
Lele50g0804 345 FunFam Auxin response factor 245 317 - -
Lele50g0804 345 Gene3D - 112 190 IPR015300 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele50g0804 Lele-ChrLele50 4952575 4954926 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0804 7 339 B3 DNA Binding Superfamily AT2G46530 64.130 5.66e-162 465