Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0801 ATGGACGCTGAAATCAAAGGACGAATCGAGACCACTGTTCGGAGGATTCTGGAAGAATCAAACATGGATGAGATCACCGAGTCCAAAATTCGGAAGCTCGCCACCAGAGAACTTGACCTCGACCTTTCGCAGTCGCATTACAAAGTCTTTGTGAAGCAAGTTGTGGAGTCTTTCATCCAGGAAAAGCAAGAGAAGCGGGAAGAGGAAGAAAATTCACAAGAGGAAACTGCTCAAGACCAGGAATATGATGATGAGGGCAATCCTATTATCTGCAAGCTTTCAGCCCAGAGAAGGGTGACGATTCAAGAATTCAGAGGGAAAACATTGATCTCTATTCGGGAGTACTATAGAAAGGACGGTAAAGAACTTCCTTCTTCTAAAGGAATAAGCTTGACGGAGGAGCAATGGTCAGCCTTGAAGAAGAATATACCTGCCGTAGAAAAAGCCATTCAGAAACTGGAGTCGAACATGACTCAGTGTTTTGTTCAGAAAAAAAGGTTATTTGCCTGTCGATTTTTGTGCTGTGGGGCACTTAAACCATGCATTGTGCCACATAGTACGAAAATCTGGAAGGAGCAGGGTCGTTCGCTTAGCAGTTCACAGAATTAA 609 0.4401 MDAEIKGRIETTVRRILEESNMDEITESKIRKLATRELDLDLSQSHYKVFVKQVVESFIQEKQEKREEEENSQEETAQDQEYDDEGNPIICKLSAQRRVTIQEFRGKTLISIREYYRKDGKELPSSKGISLTEEQWSALKKNIPAVEKAIQKLESNMTQCFVQKKRLFACRFLCCGALKPCIVPHSTKIWKEQGRSLSSSQN 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0801 202 FunFam RNA polymerase II transcriptional coactivator KELP 80 156 - -
Lele50g0801 202 Coils Coil 55 79 - -
Lele50g0801 202 MobiDBLite consensus disorder prediction 62 82 - -
Lele50g0801 202 Pfam Transcriptional Coactivator p15 (PC4) 91 142 IPR003173 GO:0003677|GO:0006355
Lele50g0801 202 Pfam DEK C terminal domain 8 59 IPR014876 -
Lele50g0801 202 Gene3D Transcriptional Coactivator Pc4; Chain A 80 159 IPR009044 GO:0003677|GO:0006355
Lele50g0801 202 SUPERFAMILY ssDNA-binding transcriptional regulator domain 90 153 IPR009044 GO:0003677|GO:0006355
Lele50g0801 202 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 5 155 IPR045125 GO:0003713|GO:0060261
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0801 Lele-ChrLele50 4923829 4926037 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lele50g0801 DEK_C 1.6e-11 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0801 50 4923829 4926037 Lele50g0801 50 4923829 4926037 ECH
Lele50g0801 50 4923829 4926037 Lele51g0782 51 4721306 4722967 hybridization
Lele50g0801 50 4923829 4926037 Lele52g0787 52 4970108 4971909 hybridization