Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0772 ATGGAGGGATTTCACGAGAGAGATGCTCATCAGCTTGAACCGCATAACATTGCTGATATAGGGTCATCCCTGTCAAATCTGATATTATCCGGTGGGACGAACCCTTTGGATTCTATTTTCTCTCACAGCCCTCAAACAAACGCCACAAATAACCCCATGTTCGAGGCCCTAGCAGGATCGTGCGCTTTTGAACCTCTCGGCTCGTCGGTGTACCTTCGTCAACGAGATATTCTGCAGAAATTCTACGAGGATAGCCGAGTGAGTACGTCATTTGGCGGTTTATCAACGACAAATCGACGTCTAAACTATGCCGGAGCGACATCATCGTACGCATACATGAACAACCCCCGCAAGAAAAAGCTATACAGGGGAGTGAGACAGAGACACTGGGGAAAATGGGTGGCAGAAATCAGACTTCCTCAGAACAGAATGAGAGTGTGGTTAGGCACTTATGAAACTGCCGAGGCTGCTGCTTATGCTTACGATCGTGCGGCTTATAAGCTCCGAGGCGAATATGCTCGTTTGAATTTCCCGAATCTAAAGGACCCCAGTAAGTTAGGATTCGGAGATAGCTCCAGATTAAATGCTTTGAAAACCTCCGTAGATTCTAAAATTCTGGCTATCTGTCAAAAGGTGAAGAGGGAGAAAGCCAAGAAGAAGAGTAGCGCTAAGAAGCCTAATCCAATTCCCAGCCCAGAACAGGATGAGAAAACACAAAAGATTGAGTCTTATTCTTGTTCATCATCCTCGCTATCCTTATCTCCATTAGTTTTTGACGATAATTGGACAAACGAGTTCATTTCACCGACGATTTCAGAAGATGGAATATGGAAGGGCGACAACTCGCCGTCAACGGTCTCAACCGATTTTCCGACAATGTTACCAGAGGAATCAGAATTCGAAGGTTGTTCCCTGGCAAGGATGCCTTCCTTCGATCCCGAGTTAATTTGGGAAGTCCTTGCTAATTAA 969 0.4572 MEGFHERDAHQLEPHNIADIGSSLSNLILSGGTNPLDSIFSHSPQTNATNNPMFEALAGSCAFEPLGSSVYLRQRDILQKFYEDSRVSTSFGGLSTTNRRLNYAGATSSYAYMNNPRKKKLYRGVRQRHWGKWVAEIRLPQNRMRVWLGTYETAEAAAYAYDRAAYKLRGEYARLNFPNLKDPSKLGFGDSSRLNALKTSVDSKILAICQKVKREKAKKKSSAKKPNPIPSPEQDEKTQKIESYSCSSSSLSLSPLVFDDNWTNEFISPTISEDGIWKGDNSPSTVSTDFPTMLPEESEFEGCSLARMPSFDPELIWEVLAN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0772 322 Pfam AP2 domain 122 171 IPR001471 GO:0003700|GO:0006355
Lele50g0772 322 PRINTS Ethylene responsive element binding protein signature 144 160 IPR001471 GO:0003700|GO:0006355
Lele50g0772 322 PRINTS Ethylene responsive element binding protein signature 122 133 IPR001471 GO:0003700|GO:0006355
Lele50g0772 322 FunFam Ethylene-responsive transcription factor 2 120 179 - -
Lele50g0772 322 ProSiteProfiles AP2/ERF domain profile. 121 178 IPR001471 GO:0003700|GO:0006355
Lele50g0772 322 MobiDBLite consensus disorder prediction 217 241 - -
Lele50g0772 322 SUPERFAMILY DNA-binding domain 121 178 IPR016177 GO:0003677
Lele50g0772 322 CDD AP2 120 180 IPR001471 GO:0003700|GO:0006355
Lele50g0772 322 Gene3D AP2/ERF domain 121 179 IPR036955 GO:0003700|GO:0006355
Lele50g0772 322 SMART rav1_2 121 184 IPR001471 GO:0003700|GO:0006355
Lele50g0772 322 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 44 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0772 Lele-ChrLele50 4753113 4754081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0772 17 322 AP2-EREBP Transcription Factor Family AT1G64380 47.198 3.71e-66 209
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele50g0772 AP2 4.1e-13 CL0081