Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0767 ATGGATAATCATCCCCCAAAACAGTCAACCTCTGAAGAAGAAGTGAGCAGTATCGAGTGGGAGTTAATAAAGATGAGTGAGCAAGAAGAGGATCTCATCCAAAGGATGTACAGGCTCGTCGGCAACAGGTGGGATTTGATCGCAGGACGCATTCCTGGTCGTAAAGCAGAAGAAATAGAGAGGTTCTGGATCATGAAACACAGTGAAGCTTTCTTTGCTCCAAGGATATATCCAGCATGTCTCAAGCCCTCCAAATAA 258 0.4496 MDNHPPKQSTSEEEVSSIEWELIKMSEQEEDLIQRMYRLVGNRWDLIAGRIPGRKAEEIERFWIMKHSEAFFAPRIYPACLKPSK 85
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0767 85 SMART sant 21 69 IPR001005 -
Lele50g0767 85 Pfam Myb-like DNA-binding domain 25 64 IPR001005 -
Lele50g0767 85 SUPERFAMILY Homeodomain-like 26 64 IPR009057 -
Lele50g0767 85 CDD SANT 24 63 IPR001005 -
Lele50g0767 85 FunFam MYB-like transcription factor 24 66 - -
Lele50g0767 85 Gene3D - 26 66 - -
Lele50g0767 85 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 24 66 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0767 Lele-ChrLele50 4727490 4728840 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0767 25 83 MYB Transcription Factor Family AT3G13540 47.458 2.88e-13 60.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele50g0767 Myb_DNA-binding 4.1e-07 CL0123