Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0766 ATGGAGGCGGCGAGGAAGTTGATGGCAGATTTTAGGACAGAATCTTCGGCAGAGAACAGGGATTTGCTGTTACAGAGGATATTATCATCTTATGAGAAGGCTCTGCTAATTCTGAAATGGAATGCGTCTAATATCAACCCTCTTCCAACGGGGACGGTGACATTACCTAGTCTGCCGCCTGAGTCTCCGATATCTGTCAACGCAAGTCCTTTCAGAGATGACAATGACGGGGATCATCCAGAGCTTAAACCCGATTCCAAGAAAAGAAAGATGATGCCCACACGGATGGAACAAGTAAGATCGATCTCTGAGAATGCCCTTGAAGGACCCCAAGATGATGGCTTCAGCTGGAGAAAATATGGACAGAAAGACATTCTGGGTGCCAAATATCATAGAAGTTACTATAGGTGCACCCTCCGCAAGACTCAGAACTGCTGGGCCACGAAGCAAATACAAAGATCAGATGAAGACCCTACTGTATTTGACATCACTTACCGAGGAAGGCATACTTGTTCGCTGGGAAATAATGCTGTTCAACCACCTAAATCTCCAGACAAACAGGAGAAAATGCATAATTATGAAAGTGACATCTACCATCACAAGCCATTACAAGAGAGCTTAATGAAATTCAGAAATAACTTGAGTGTCAATAGAGAAAACCTTGAAAACGAGGAGATGGCAAATCCTTTTGCTTTCCTTTCAACTTCCTCTGGATACATGACACCAGAAAGCCACAGCTTAACTCCCTTGGCACCAGAGAATGATCCATTCTGGGGGAACCTTTCACAAACAGACTTGCTATCTCCAAACACGCCACAATCGCACTATTTACCATCTCTGTCTTTCAAGGTCGATGAGTTCCATGGCATAAAAAACCAGCCATGCTCAGAATCTGACATTACTGAGATCATTTCAGCCAACACATCAGCCAGCAATTCTCCAATTCTGGATTTTCATTTCCCTATTGATCCGGTGGAAATTGATCCAAATTTCCCTTTTGACACCCCGGGGCTTTTCCCATGA 1023 0.4399 MEAARKLMADFRTESSAENRDLLLQRILSSYEKALLILKWNASNINPLPTGTVTLPSLPPESPISVNASPFRDDNDGDHPELKPDSKKRKMMPTRMEQVRSISENALEGPQDDGFSWRKYGQKDILGAKYHRSYYRCTLRKTQNCWATKQIQRSDEDPTVFDITYRGRHTCSLGNNAVQPPKSPDKQEKMHNYESDIYHHKPLQESLMKFRNNLSVNRENLENEEMANPFAFLSTSSGYMTPESHSLTPLAPENDPFWGNLSQTDLLSPNTPQSHYLPSLSFKVDEFHGIKNQPCSESDITEIISANTSASNSPILDFHFPIDPVEIDPNFPFDTPGLFP 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0766 340 MobiDBLite consensus disorder prediction 53 97 - -
Lele50g0766 340 SMART WRKY_cls 111 173 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele50g0766 340 FunFam WRKY transcription factor 53 97 174 - -
Lele50g0766 340 Gene3D WRKY domain 97 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele50g0766 340 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 23 249 IPR044810 GO:0003700
Lele50g0766 340 MobiDBLite consensus disorder prediction 72 95 - -
Lele50g0766 340 Pfam WRKY DNA -binding domain 112 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele50g0766 340 ProSiteProfiles WRKY domain profile. 106 174 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele50g0766 340 SUPERFAMILY WRKY DNA-binding domain 110 173 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0766 Lele-ChrLele50 4721822 4723024 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0766 1 223 WRKY Transcription Factor Family AT4G23810 45.161 1.07e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele50g0766 WRKY 8.1e-25 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0766 50 4721822 4723024 Lele51g0747 51 4523851 4525110 hybridization
Lele50g0766 50 4721822 4723024 Lele52g0754 52 4766013 4767272 hybridization