Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0755 ATGAAGCCATTTAACAAAGTACAGTTCGTATTGGTGTTCTTGGAGCCAGTGGCTACACCGGTGCTGAGGAAAGCTGGGCAGCCAATTGCATCTGTCTTTCCTCATTTGGCTACACAGAATTTGCCGGATTTGATTGCAGTTAAGGATGCAAACTTTTCTGATGTGGATGCTGCATTCTGTTGCTTGCCACATGGAACCACTCAGGACTTCCGCCTACGAGATATATCTGCGTATGAAGAGTTGTATGGTCAGCCACACCGAGCACCGGATTTGCAGGTTGTTATCCAACATCCATTCAACTTCCTCTTGTCCCACTGCATTACTTGCCGTAAACCAGTGCCTATGGAACATGGACTGAAATTGTTCAGAGTAAAAGATCAAGTCTTACTTTATTGTGGGAGAAGGATTTTCCACCTTGCTTATCCTTGGAATTCTGCACATGATCTGTTTTTGGGTATGCCTCTTGTTGATATGCTAGAGAGATTGATTGCATTCGAGTCATATAGACATGCCCAGATGCTACAGAACCTCAAATTAGCGGCGGGTCCAGCAGTTTTTGCGCCAACGCCAGCACCAGCACTGCTGGAGGGGGGGATCGTCAGAAATCGAGGCTTGCCGAGAGGGTTACAACGTCGTAAATGGGGGATCTACGTGGCGGAGATCCAAGACCTGTTTGAAGTCCGAGTGTGGCTCGGAACATATAATACTGTGGAAGAAGTTGATTTGGCTTATGAGAACAAGAAGAAGGAATTTGAAAGGTTGATGAAGTCCTTTTCATCTGCATCATCTATGCTCGAAGTCACTAATAATAATAATGAAACAAATTCATTGGGTAGTGACGGTGATGGTTCTGAGAAAGAGATGAATGCGAAAGCAGAATTACAATATTCTGAGGAAGAAGGGCTAATCTTACTTATTGTTATTATTGATGCAAAATCTGGTGTCAGCGGGGCAGGGCGTAGGACGAAGGAACATCTATTATTTACAGAAGTAGCTGAAGGTATCAATTCATATGGTGTCGCCCGACATCGCTATGTTCCTGAAACTGAACAAGGACTCTCAGATGCTGCACGTTCAAGAGTAACCATTAGTTTCACCCCACACTTGATTCCCATGATCCGTGGTATGCAATCAACTATCTATGTGGAAATGGTTCCAGGAGTTAGAATTGAGGACTTGCACCAGCAGCTGAGCCAATTCTATAAGGATGAAGAATTTATCCGAGTGTTGGAAGACGGAGTCATCTCTCGAGATGAAAATAAGGGAAATAGAGGTGGGGCATTAAATGCGAGTTCGGTAAATGTTGGAGGAGAAGAAGCAGTGAAGCAGAGGAGAGAGATTTTAGGGCTTTGCTTTTGCATTGATATATGGCTCCTACTTTTGTCGGTGACACTTGACAGGGAGGGCATTAAATGTGAGTGGAAAAGGAAAGGAGCTGTGAAAAAGAAAGGAGAGGGTGAATCAATTGAGGATTCCAAAATGACAGGGCATGCAGTGAGGGGCTCAAGGCAGGGAGGCGAGATGTTGAATTTGACTTTTGTGAATGTATGCGTTTGTGATTTGCCATGGAACTCTCTGTTCCTCTTTGTCTCCTCCTTTGTTCTTTAG 1608 0.4434 MKPFNKVQFVLVFLEPVATPVLRKAGQPIASVFPHLATQNLPDLIAVKDANFSDVDAAFCCLPHGTTQDFRLRDISAYEELYGQPHRAPDLQVVIQHPFNFLLSHCITCRKPVPMEHGLKLFRVKDQVLLYCGRRIFHLAYPWNSAHDLFLGMPLVDMLERLIAFESYRHAQMLQNLKLAAGPAVFAPTPAPALLEGGIVRNRGLPRGLQRRKWGIYVAEIQDLFEVRVWLGTYNTVEEVDLAYENKKKEFERLMKSFSSASSMLEVTNNNNETNSLGSDGDGSEKEMNAKAELQYSEEEGLILLIVIIDAKSGVSGAGRRTKEHLLFTEVAEGINSYGVARHRYVPETEQGLSDAARSRVTISFTPHLIPMIRGMQSTIYVEMVPGVRIEDLHQQLSQFYKDEEFIRVLEDGVISRDENKGNRGGALNASSVNVGGEEAVKQRREILGLCFCIDIWLLLLSVTLDREGIKCEWKRKGAVKKKGEGESIEDSKMTGHAVRGSRQGGEMLNLTFVNVCVCDLPWNSLFLFVSSFVL 535
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0755 535 SMART rav1_2 207 272 IPR001471 GO:0003700|GO:0006355
Lele50g0755 535 ProSiteProfiles AP2/ERF domain profile. 205 261 IPR001471 GO:0003700|GO:0006355
Lele50g0755 535 PANTHER N-ACETYL-GAMMA-GLUTAMYL-PHOSPHATE REDUCTASE, CHLOROPLASTIC-RELATED-RELATED 23 92 - -
Lele50g0755 535 SUPERFAMILY DNA-binding domain 207 251 IPR016177 GO:0003677
Lele50g0755 535 Gene3D - 14 96 - -
Lele50g0755 535 Pfam Semialdehyde dehydrogenase, dimerisation domain 307 411 IPR012280 GO:0008652|GO:0016620|GO:0046983
Lele50g0755 535 Gene3D Dihydrodipicolinate Reductase; domain 2 296 437 - -
Lele50g0755 535 Gene3D AP2/ERF domain 207 256 IPR036955 GO:0003700|GO:0006355
Lele50g0755 535 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 20 92 IPR036291 -
Lele50g0755 535 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 307 414 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0755 Lele-ChrLele50 4650379 4656793 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0755 145 252 AP2-EREBP Transcription Factor Family AT1G28370 34.821 1.67e-09 56.2