Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0752 ATGGCATTTCTACGCATTTTCTATTACATTTGCCTACTGGATCTGATTATCCGGCAAGGAAATGCAGAGCCGATTGAAGATAAGCGAGCTTTGCTTGATTTTGTGAACCAGTTCTCTCACTCTCGTCCTCTAAATTGGAATGAGAACTCTTCTGTGCGTACTAATTGGACTGGAGTCACTTGTAACGAAGATAAGTCCCGAGTAATAGCCGTTCGGCTGCCGGGAATTGGGTTTCATGGAGCAATTCCGCCCAACACAATTAGCCGCCTCTCAGCGCTGCAAATCGTGAGCCTCAGATCCAATTTTATCAGTGGGAGTTTCCCTTCTGATTTTTCTGAGTTAAAAAATCTGTCTGTGCTGTATCTTCAATTTAACGACCTTTCGGGTTCTTTACCGGATTTCTCAGTCTGGAAGAATCTTACCATTGTCAACTTGTCCAATAATCGTTTCAATGGCAGCATTCCTTTCTCAATTTCTAATTTGACTGAGCTTGCTGGTTTGAATCTGGCAAACAACTCGCTTTCTGGTGAAATTCCTGATATCCAATTGCCCAGATTGCAACAGCTGAATTTGTCTAACAACAACTTGAACGGTAGTGTGCCTAATTCTCTCCAGAGGTTTCCTATGACATCATTCCTCGGTAATAATATATCTTTTGGAAATGATCCTCACCTTTCTCCCGTACTTCCTCCTTCTTCCAAACCATCTTCAAAATCCAAGAAACATGGAGGTCTCAGTGAAGCAGCCCTACTAGGAATTTCGGTTGCTGCTGGTGTGCTTGCTCTTTTAGCATTTGGTTTTCTGATGTTTGTATGCTTCTCAAGAAGGAGGGACGAAGATGGGTTCTCTGGGAAGTTGCAGAAGGGAGGAATGTCTCCAGAGAAAGAAGTTTCGAGAAATCAAGATGCGAATAATAGACTTGTTTTCTTTGAGGGATGTAACTATGCCTTTGACTTGGAGGATTTGTTAAGGGCTTCTGCTGAGGTACTGGGCAAGGGAACATTTGGCACTGCATACAAGGCCATACTAGAGGATGCTTCCACGGTCGTCGTAAAGAGGCTGAAGGATGTAGCTGTTGGTAAAAAAGACTTTGAGCAACACATGGAGATTGTGGGAAGTCTTAAACATGATAATGTGGTTGAACTGAAAGCATACTACTATTCAAAGGATGAGAAATTGATGGTGTATGATTATTACATCCAGGGGAGCCTCTCTTCTTTACTGCATGGCAAAAGAGGAGAGGATAGGGTGGCTTTAGATTGGGATTGTCGGCTTAAAATAGCACTAGGTGCTGCAAGGGGGATTGCACGTATCCATGCTGAGAACGGTGGAAAGATGGTGCATGGAAACATCAAATCTTCAAATATCTTTGTCAACTCTAAGCAATATGGTTGCGTGTCTGATCTTGGGTTAGCCATGATAATGAGCTCACTAGCCCTCCCCATCTCACGCGCTTCTGGCTATCGAGCACCCGAAGTTACAGACACCAGAAAAGCAGCACAGCCTTCAGATATTTACTGTTTTGGAGTGGTGTTACTGGAGCTTCTGACTGGGAAATCCCCCATACTTACTACAGGTGGGGATGAGATTGTCCACCTGGTGAGGTGGGTGCATTCAGTAGTGCGAGAGGAGTGGACAGCTGAAGTGTTTGATCTGGAACTCATGAGATATCCAAATATAGAAGAAGAGATGGTGGAGATGTTGCAGATAGCCATGGCGTGCGTGGCAAGGATGCCAGATCAGAGACCGAATATTTCGGATGTTGTAAAGATGATAGAAAATGTGAGACAAGTTGATATGGAGAATCGTCCAACACCACGTGAGAGCCAAGCTGAAAGTGGAACACCAACTTCAGTGTTAGGTAACAAATCACTAATTCTTTGA 1884 0.4384 MAFLRIFYYICLLDLIIRQGNAEPIEDKRALLDFVNQFSHSRPLNWNENSSVRTNWTGVTCNEDKSRVIAVRLPGIGFHGAIPPNTISRLSALQIVSLRSNFISGSFPSDFSELKNLSVLYLQFNDLSGSLPDFSVWKNLTIVNLSNNRFNGSIPFSISNLTELAGLNLANNSLSGEIPDIQLPRLQQLNLSNNNLNGSVPNSLQRFPMTSFLGNNISFGNDPHLSPVLPPSSKPSSKSKKHGGLSEAALLGISVAAGVLALLAFGFLMFVCFSRRRDEDGFSGKLQKGGMSPEKEVSRNQDANNRLVFFEGCNYAFDLEDLLRASAEVLGKGTFGTAYKAILEDASTVVVKRLKDVAVGKKDFEQHMEIVGSLKHDNVVELKAYYYSKDEKLMVYDYYIQGSLSSLLHGKRGEDRVALDWDCRLKIALGAARGIARIHAENGGKMVHGNIKSSNIFVNSKQYGCVSDLGLAMIMSSLALPISRASGYRAPEVTDTRKAAQPSDIYCFGVVLLELLTGKSPILTTGGDEIVHLVRWVHSVVREEWTAEVFDLELMRYPNIEEEMVEMLQIAMACVARMPDQRPNISDVVKMIENVRQVDMENRPTPRESQAESGTPTSVLGNKSLIL 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0752 627 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Lele50g0752 627 SUPERFAMILY L domain-like 39 208 - -
Lele50g0752 627 Gene3D Transferase(Phosphotransferase) domain 1 400 613 - -
Lele50g0752 627 Gene3D Phosphorylase Kinase; domain 1 291 398 - -
Lele50g0752 627 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 399 606 - -
Lele50g0752 627 MobiDBLite consensus disorder prediction 599 627 - -
Lele50g0752 627 Gene3D Ribonuclease Inhibitor 136 225 IPR032675 -
Lele50g0752 627 PANTHER OS05G0588300 PROTEIN 11 604 - -
Lele50g0752 627 FunFam Probable inactive receptor kinase RLK902 24 182 - -
Lele50g0752 627 ProSitePatterns Protein kinases ATP-binding region signature. 330 361 IPR017441 GO:0005524
Lele50g0752 627 ProSiteProfiles Protein kinase domain profile. 324 595 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele50g0752 627 Gene3D Ribonuclease Inhibitor 26 135 IPR032675 -
Lele50g0752 627 FunFam pollen receptor-like kinase 1 293 398 - -
Lele50g0752 627 SUPERFAMILY Protein kinase-like (PK-like) 328 592 IPR011009 -
Lele50g0752 627 MobiDBLite consensus disorder prediction 607 627 - -
Lele50g0752 627 Pfam Protein kinase domain 327 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0752 Lele-ChrLele50 4639676 4642569 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0752 16 619 Receptor kinase-like Gene Family AT4G23740 64.791 0.0 786
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Lele50g0752 Pkinase 2.2e-33 CL0016