Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0718 ATGGAAGAGGGTCACTCAACGTTGGATATTTATAGTGTTACCCAGAAAGAGAACGTGCCTGCGTCTTCTGCTATTTCCTTCATGGATGAATCTGCGTGCTTGATGGACTGGGATTTGCAAGCTATTGTAATTCCCGATGATCCTTTCTGCAGTACTTTCCCAGAATTCTCAGACACCACCATGGTGCTTGATGAATTGGCAGAACTTTACAAGCCTTTCTCAACACAAACAATCACCACCACAACTTCTGTAGCCATCCCTAAAGAAGTCAAAGCATCATCAGAGGAAGTACAAGATTTGCATGAATCTCCAAGCAAAAGAAGCAAGAAGAACCAGAACAAGAGAGTAGTGAAGAAGGTGAGAGAAGGTGGACTATGTGACGCATGGGCATGGCGTAAATATGGACAGAAACCGATCAAGGGATCGCCATATCCAAGAAGCTATTACAAATGTAGCAGCTCCAAAGGATGCATGGCGAGGAAACAAGTGGAAAGGAGCCATATGGATCCTCAAGTTTTCATAGTGTCTTATACTGCAGAACACAGTGATCATCACCCACCTCGTTCCTCTCGAAAAACTAGGCACTCTAATATTATTCCACCGCCTGAAACTACTCAACAAACTTCTTCCGATCCTTTGGAAGACTCCCTTATTGAAGATGAGCCAATTGTGTCCCAAGGTGCTGAAATTGGTGAGATTGTCACAAATGATGATTGGTTTCCAAGTATAGACGAACTTGATGGACTTAGCAAAGAATTCGCATTAGGTGGTTACCTTCATGGCCAATTCTGA 792 0.4331 MEEGHSTLDIYSVTQKENVPASSAISFMDESACLMDWDLQAIVIPDDPFCSTFPEFSDTTMVLDELAELYKPFSTQTITTTTSVAIPKEVKASSEEVQDLHESPSKRSKKNQNKRVVKKVREGGLCDAWAWRKYGQKPIKGSPYPRSYYKCSSSKGCMARKQVERSHMDPQVFIVSYTAEHSDHHPPRSSRKTRHSNIIPPPETTQQTSSDPLEDSLIEDEPIVSQGAEIGEIVTNDDWFPSIDELDGLSKEFALGGYLHGQF 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0718 263 MobiDBLite consensus disorder prediction 193 213 - -
Lele50g0718 263 ProSiteProfiles WRKY domain profile. 120 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele50g0718 263 MobiDBLite consensus disorder prediction 179 214 - -
Lele50g0718 263 MobiDBLite consensus disorder prediction 95 109 - -
Lele50g0718 263 Pfam WRKY DNA -binding domain 127 182 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele50g0718 263 SUPERFAMILY WRKY DNA-binding domain 125 186 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele50g0718 263 SMART WRKY_cls 125 186 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele50g0718 263 MobiDBLite consensus disorder prediction 95 117 - -
Lele50g0718 263 Gene3D WRKY domain 109 179 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele50g0718 263 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 87 210 IPR044810 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0718 Lele-ChrLele50 4407681 4409293 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0718 28 208 WRKY Transcription Factor Family AT4G23550 44.690 3.20e-41 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele50g0718 WRKY 5.6e-23 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0718 50 4407681 4409293 Lele51g0704 51 4241144 4242100 hybridization
Lele50g0718 50 4407681 4409293 Lele52g0710 52 4459450 4460941 hybridization