Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0694 ATGGGATTCCCGCTGGGCTACACAGACCTAATCTTCCCCAAGATATTCCTTCACGTTCTCTCTCTTCTTGGTTTCGTCCGGAAATTCATCACCATTCTCTTTCGCTACCTGGGGCTCCACGATTTTCTGGAACCCGACATTGTTTGGCCCCAACCGGCACCCGAATTTCACTCGGTGTCGGCGATGCTGATCCGCGAAATCCTGCCGCTGGCCAAGTTCTCGGACCTGGTGGACCCGCCGGAATGCTGCGCCGTGTGTCTGTACGAGTTCGAGGCGGAGGACGAGATCAGGCGGCTGACCAACTGTAGGCACATATATCACCGGGGATGTCTGGACCGTTGGATGGGTTACGATCAGAGCACGTGTCCCTTGTGTCGAACACCTTTCATACCTCACGATATGCAAGCTGCCTTCAATGATAGACTCTGGGCTGCTGCTGGCATTCCTGAATTCTACGCTGATTCTGAAGAATATCCCTATCTTTCTTCTTTTTAG 495 0.5293 MGFPLGYTDLIFPKIFLHVLSLLGFVRKFITILFRYLGLHDFLEPDIVWPQPAPEFHSVSAMLIREILPLAKFSDLVDPPECCAVCLYEFEAEDEIRRLTNCRHIYHRGCLDRWMGYDQSTCPLCRTPFIPHDMQAAFNDRLWAAAGIPEFYADSEEYPYLSSF 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0694 164 Pfam Ring finger domain 83 126 IPR001841 -
Lele50g0694 164 SMART ring_2 83 125 IPR001841 -
Lele50g0694 164 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 77 129 IPR013083 -
Lele50g0694 164 ProSiteProfiles Zinc finger RING-type profile. 83 126 IPR001841 -
Lele50g0694 164 PANTHER RING ZINC FINGER PROTEIN-RELATED 20 145 - -
Lele50g0694 164 SUPERFAMILY RING/U-box 63 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0694 Lele-ChrLele50 4294416 4294910 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0694 1 147 C3H Transcription Factor Family AT1G63840 58.442 2.19e-62 188