Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0692 ATGGAGTCAACTCAGACGAAGGAAGGCTCGCTCTTAGAGGAAGCAAACTTCAAAGTAGGCCGTTACAGTGCCGAAGAAAGAAAAGAGAAAATCTCCAAGTACAGAGCCAAACGAAGCCAGAGGAACTTCAACAAGACGATCAAGTATGCATGCCGGAAGACACTGGCGGACAATCGGCCACGCATACGTGGCAGATTCGCACGCAACGAGGATACCGGCGAGAATTCCAAGGGTTTATGTTCCACCAGAAATGAAGAAGACGACGAGTTCTGGTTTGAAGGTTTGCATGAAGAGCAAGAGCAGATGATGGCGATGAGAATGGGAGGAGGACAATACATGAACAGTTTTGGAGATCCTCAATTCCAATATCATAGCTTTTGA 381 0.4698 MESTQTKEGSLLEEANFKVGRYSAEERKEKISKYRAKRSQRNFNKTIKYACRKTLADNRPRIRGRFARNEDTGENSKGLCSTRNEEDDEFWFEGLHEEQEQMMAMRMGGGQYMNSFGDPQFQYHSF 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0692 126 Pfam CCT motif 27 69 IPR010402 GO:0005515
Lele50g0692 126 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 14 103 IPR045281 GO:0009909
Lele50g0692 126 ProSiteProfiles CCT domain profile. 27 69 IPR010402 GO:0005515
Lele50g0692 126 MobiDBLite consensus disorder prediction 62 81 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0692 Lele-ChrLele50 4286595 4287192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0692 23 75 C2C2-CO-like Transcription Factor Family AT5G24930 50.943 1.81e-11 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Lele50g0692 CCT 1.4e-18 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0692 50 4286595 4287192 Lele51g0679 51 4129102 4130451 hybridization