Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0674 ATGGTACCAGAGAACCTGAAGAAACAACTCGCCTTGGCCGTGAGAAGCATCCAATGGAGCTACGCAATCTACTGGACTGGTTCACCTGACAATCCCGGGGCGTTCGAGTGGGGTGAAGGGTACTACAACGGGGACATAAAGACGAGGAAAACAAGCCAAGCAGTGGAACTTAATTCCGACCAAATAGGTTTAAGGAGGAGTGAGCAGCTCAGAGATCTATATGAGTCCCTTGCAACTGCAGAATCAAGTCCACAAGCTAAAAGGCCTTCAGCTGCATTATCTCCTGAGGATCTCACTGACACAGAATGGTTGCCTGGAAGAACACTGGCCAAAGGCCAACCCATTTGGCTGTACAATGCCCATTTGGCTGATAGTAGAATTTTTAGTCGCTCTCTTCTGGCAAAGAGTGCATCCATTCAGACAGTGGTATGCTTTCCTTTTCTGGATGGTGTTCTCGAGTTAGGTACAATTGATCTGGTCTCAGAGGACCTCAGTCTCATTCAACGCATGAGAACTTCTTACTTGGATATTTTAGATGCCAAAGTTCGCAAGAACTCTGTAGTTGCATTCGATGCAGGAGACGGTGAAGAAATTGCTGGCGCAGTATTTGATCATAATGCTGAATCAGAATATGAAGTAGCCAATGCAATTTCTCCCAATAATAGTTCAAATGAGTTACAAGCCAATAAACAAGCAGATGAGAGATTCATGGCTGAAAGAATCAATGATGTTGCTACTTCCCACCAGGTCCAAAACTGGCAAGTGATGGAGGATGAGTTGGGTAATTGTGCCCATACTTCAATGAATACTAGTGACTGTATATCCCAAACTTTTGCTGGTTCTGAAAAGAATAATGCTTCTCTTCCCAAGGGTGATCATCGTGGGCAAGATCTTCAAGATGGAAAAAACACGAAAACGACTGTGGTTGATGTTCATAGTGATGATTGGCATTATCAAAGTGTTCTTTCTTCTCTTCTTAAAAGCTCAGACCAATTAATCATGGGAGCTCATTTTCAAAACTCCCATTGTGAATCCGGCTTTGTCGGTTGGAAGAGAGAAGGACCAACTGGTGGTTGTCAAAGGCCTAGAGGGGGGAACCAAAAATTATTGAAGAAGATATTGTTTGAAGTTCCTCGTATGCACATGGATTGGTTGCTTGAGTGTCAAGAAGAAAATGACTATAAAGAGGGAATGAGACCTGAAGCTGCTGATGAAATTGGCTTGAACCATGTACTGTCTGAACGAAAGAGAAGGGCAAAACTAAATGAAAGGTTTTTAACCCTTAAATCAATGTTTCCTTTGATTACTAGGGATGATAAAGTTTCAATACTAGATGAGGCAATAACATACCTTAAAAAGCTGGAGAAAAAGGTGAGAGATTTGGAAGCTCGCCGGGAATCCAAAGATTCGGAGACAAGAACTAAAAGAGCACCTCAAGATGTGGTGGAAAGGACTTGTGATAATTATTGTAACAGATCAGATAATGGCAAGAAGTCTGCAATGAACAAAAGGAAGGCTTGTGACATTGATGAGACGGAGACAGAGATTGATTCAGTTCGTCTAAAAGATATTTCTAATAATGTCACTATCTGTATGAATGACAATGAGGTTTTGATTGAATTGAAGTGTCCTTGGAGAGAAGGAGTTCTACTAGAAATAATGGAAGCAGTCAGCAATCTTCATTTAGATTTTCATGCAGTCCATTCATCAGAAGCTGATGGGACTCTCTATTTAACTATGAAATCCAAGATCAGAGGAGCAGCTTTTACATCAACAAAAAAGATCAAACAAGCACTGGTCAAGGCAGCTTGGAAGTGTTGA 1821 0.4157 MVPENLKKQLALAVRSIQWSYAIYWTGSPDNPGAFEWGEGYYNGDIKTRKTSQAVELNSDQIGLRRSEQLRDLYESLATAESSPQAKRPSAALSPEDLTDTEWLPGRTLAKGQPIWLYNAHLADSRIFSRSLLAKSASIQTVVCFPFLDGVLELGTIDLVSEDLSLIQRMRTSYLDILDAKVRKNSVVAFDAGDGEEIAGAVFDHNAESEYEVANAISPNNSSNELQANKQADERFMAERINDVATSHQVQNWQVMEDELGNCAHTSMNTSDCISQTFAGSEKNNASLPKGDHRGQDLQDGKNTKTTVVDVHSDDWHYQSVLSSLLKSSDQLIMGAHFQNSHCESGFVGWKREGPTGGCQRPRGGNQKLLKKILFEVPRMHMDWLLECQEENDYKEGMRPEAADEIGLNHVLSERKRRAKLNERFLTLKSMFPLITRDDKVSILDEAITYLKKLEKKVRDLEARRESKDSETRTKRAPQDVVERTCDNYCNRSDNGKKSAMNKRKACDIDETETEIDSVRLKDISNNVTICMNDNEVLIELKCPWREGVLLEIMEAVSNLHLDFHAVHSSEADGTLYLTMKSKIRGAAFTSTKKIKQALVKAAWKC 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0674 606 Gene3D - 408 478 IPR036638 GO:0046983
Lele50g0674 606 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 405 454 IPR011598 GO:0046983
Lele50g0674 606 Pfam Helix-loop-helix DNA-binding domain 409 455 IPR011598 GO:0046983
Lele50g0674 606 PANTHER TRANSCRIPTION FACTOR TT8 2 600 - -
Lele50g0674 606 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 408 467 IPR036638 GO:0046983
Lele50g0674 606 SMART finulus 411 460 IPR011598 GO:0046983
Lele50g0674 606 MobiDBLite consensus disorder prediction 283 302 - -
Lele50g0674 606 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 6 173 IPR025610 -
Lele50g0674 606 Coils Coil 444 471 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0674 Lele-ChrLele50 4151315 4154513 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0674 2 606 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G41315 45.329 3.60e-173 504
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele50g0674 bHLH-MYC_N 1.8e-34 CL0161