Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0673 ATGCAGCTGGAACAAGATGAACTGGGAAAAGGAGAAACTAACAACTTAGGTCGAGATGTTAACCAAATAGAAGCTTTAGGAGGCATGCTTGAAGGTGCTCCCGAGCATCACAATGGAAGTAAGTCTAATGAACTGTTCCAGTTGAATCAAGAATCGCATGTGGATCTTTTTCCTGCTAGAAGTATGGAATTGGCTTCAAACAGTATGGAAAGTACCCCAACTCCACTGCTCTTCAACGTCGGAAGTAGGATTCTGAATGACATATTTGTCAGAATGAATGGAGATGTACCTCATCAAAACAAGCTTTTAAAAGCACGTGAAGGGAAATATCAATCAAGAATAAATGCACTTGAAGCCCTCGTGGCAGGGACAACTGAAGAGAACGAGCATGAGAAAACTGAACTGGAGAAGAAGAAACTTGAAGAGCAGGATTATACTCAATTTAAAAGGGACAAAGTTCGCTATGAAATTGAGATTTCTGCACTGAAGAAAGAACTGGAAACGACTAAAAGGGCACATGAAGAGCAGTGCTCGCTGTTAGAATTGCATATTAGTGAATCTAAAGCTCATTATGAGAAGAGAATAGAAGAACTTGAGAGTCATCTAGCTAATGCAAAGACACAAGGGAAGGAACTGAAGACCTTTTTGAAATCCAAATCTTTGAAATGGAAGGACAAGGAGCATACCTTTGAGAGTTTCCTAAATGGCCAATTTGGAGCTTTCCAAGAACTAAGAGCTGCAATGGAATCTGTGAAAATGGAATTACTAAAATCAAAGAGGAGCTACTCCGAGGAACTCAAATACTTAGGAATGAAGCTCAATGGTCTAGCTGAAGCTGCTCGAAATTATCATGAAGTTCTTGCAGAAAATAGAAAATTGTACAATGAAGTTCAAGATATGAAAGGAACAATTAGAGTATATTGTCGAATCAGACCATTTCTTCCAGGGCAAAGCCAACAGCAGACAACTATTGAGTTTGTTGGTGATAACGGTGAATTAATTGTTAGTAATCCTCTCAAGCAAGGGACCGAAAGTTGTAAGCTTTTTAAGTTTAACAAGGTTTTTGGTACATCAGCAACTCAAGAGGAAGTATACAATGACATCCAACCGCTCATTCGTTCTGTTCTGGATGGCTACAATGTTTGTATATTTGCATACGGTCAAACTGGTTCCGGAAAGACGTACACCATGAGTGGACCTAGCTTATCATCTAAATCAAATTGGGGAGTCAACTACCGAGCACTTCATGATCTTTTCCAAATCTCTCAGAGTAGGAGAGGCTCTATCATGTATGAAGTTGGTGTTCAAATGGTTGAAATTTACAATGAAGTAGTTCGTGATTTGTTATCAAGCAAGGGTCCTCAAAAGAGATATCCTTTTCTTTTCTTTTTTTTCCCTTATGATTACTAA 1410 0.3887 MQLEQDELGKGETNNLGRDVNQIEALGGMLEGAPEHHNGSKSNELFQLNQESHVDLFPARSMELASNSMESTPTPLLFNVGSRILNDIFVRMNGDVPHQNKLLKAREGKYQSRINALEALVAGTTEENEHEKTELEKKKLEEQDYTQFKRDKVRYEIEISALKKELETTKRAHEEQCSLLELHISESKAHYEKRIEELESHLANAKTQGKELKTFLKSKSLKWKDKEHTFESFLNGQFGAFQELRAAMESVKMELLKSKRSYSEELKYLGMKLNGLAEAARNYHEVLAENRKLYNEVQDMKGTIRVYCRIRPFLPGQSQQQTTIEFVGDNGELIVSNPLKQGTESCKLFKFNKVFGTSATQEEVYNDIQPLIRSVLDGYNVCIFAYGQTGSGKTYTMSGPSLSSKSNWGVNYRALHDLFQISQSRRGSIMYEVGVQMVEIYNEVVRDLLSSKGPQKRYPFLFFFFPYDY 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0673 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 280 455 IPR027417 -
Lele50g0673 469 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein with CH (Calponin Homology) domain 245 458 - -
Lele50g0673 469 Coils Coil 114 143 - -
Lele50g0673 469 Coils Coil 188 208 - -
Lele50g0673 469 Coils Coil 145 183 - -
Lele50g0673 469 Coils Coil 276 296 - -
Lele50g0673 469 Pfam Microtubule binding 288 449 IPR031852 GO:0008017
Lele50g0673 469 Gene3D Kinesin motor domain 245 460 IPR036961 -
Lele50g0673 469 ProSiteProfiles Kinesin motor domain profile. 303 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele50g0673 469 PANTHER KINESIN-LIKE PROTEIN KLP-3 33 457 - -
Lele50g0673 469 SMART kinesin_4 301 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0673 Lele-ChrLele50 4138563 4141930 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0673 227 456 Calmodulin-binding Proteins AT5G65930 34.855 1.50e-31 127