Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0672 ATGGTTTTTCTTGACTTGCTTACAATAGGAATTTGGAATACTGCCCAACCAAATGGGTTGGTGGTCCCTGATGCAAGCATGCATTCTGTTAATTCAATGAAAGATGTCTTGGAGTTGATGAATATTGGGCAGATGAATCGAGCAACTAGTGTCACAGCTTTAAATGAAAGAAGTAGTAGATCCCATAGTGTTCTCACTGTTCATGTCCGGGGCACGGATTTGGGAACCAACACTATATTGCGTAGCTGCCTGCATCTTGTAGATCTCGCAGGAAGTGAACGAGTAGACCGTTCTGAAGCAACGGGAGATAGGTTAAAGGAGGCACAACATATAAACAAATCGCTATCTGCCCTTGGAGATGTGATCTTTGCTTTGGCTCAAAAGAGTCAACATGTCCCATACAGAAATAGTAAATTAACACAACTTCTTCAAAGTTCATTAGGTGGCCAAGCAAAAACCCTTATGTTTGTGCAGCTTAATCCTGATATTGCTTCATATTCTGAAACAATAAGCACGTTAAAGTTTGCTAAGAGGGTTTCTGGTGTTGAGTTGGGTGCTGCACGTAGCAACAAAGAGGGGAAGGATGTCAGACAACTCATGGAACAGTTAACATATTTGAAAGATGCTGTTATGAGAAAGGATGAAGAGATTGAGCGATTGCAGATGTTCAAGGCAAATTACGAAAACTCAAAGCAGGGTATGATCTCACCAAGGCATGAATCATCAATTCATAGAAGTCAACCCATAAGAACTCCCCGACATGGCCAAAAACTTTTAGGAATTGGTCAAAAACCTGGTTCTGACATGGGCAACTGCTCTGAGTATGATGAGAAGCATTCAGAACCAGGCTTTAGTTATTCAATGGATGAACTCAGCAAAAACCCAGATTCCCTACAGTTAAAATTAACCAGAGAAGATAAAGATAAGAATTTCAATGAGGTCGACCAGCTGTTAGGAACTGGAGATGCAAATATTGAAGAGAGATTAAGTGACATATCAGATGGTGATCTCTCAATGGGAACAGAAACTGATCGTTCCATCAACAGTATTGTGGAGTACACCCTTTTTCCTGAAGCAGAGAAGTCAGCTGTACTTACACCACCTAGAAGGATAACCGAGATCATTCCAGCTGAGGACACAGAGAAGCGATTTACTATGCCATCGTCGTTGAAGATTTCCAGATCCTCACAAGTCCTACACAGAGTGCAGATGAAATCATCGAGGATGTCACTGAATAGAAGCTCCTCAAAGGTTATCTCAAATCAGCCTGCATCTATGCGCCTTTACAGAAAGGACCGAGATCTGGATCATAGTTATGCAACCAAAGAGGTGCTACTTATGACCGCTCAACTATCGTTCACAACCAGGGAACCTCATTCGCATAACGTGACCTGTTCCCATTCTGCCTTTCCTATCAAGATCTCGTCAGGCTCTTTGCTTCAAGGAGATAACAAAAGATTCGAGAATATGTCTGGACACAATAGTTCACATAGAAGTAATCAGCATTCGATCAAATATAATAGAAACCAACACAGGTTTCCACCCTTTGAAGCTGATATTTCTTGTGTAAATTACAAACCCTCTCTTTCCAATGATGAGGCTAAGCAGTTCCACAAAAATCCCAACCTTAAGTCCCCAGAGATAATAAGCACAGCTCGGTTCATCTCTGCTCTAGGCCATATACGGGATTCTGCAAGTCAATCACTTTCATGTGTCAGATCTAAGCAAATTGTGAATCAAGATGATATATGTTTCCAGAAAGGAAAAGTTCTGATTAATTATGGAGAGAAAAAAGATGAAAGGGCATATGGTTCCAATGATACTAATTACAGTGCTGTTAATGTGAGGGACGCTAGCTTTGTTTCATCCTCTATGCCAGCAAACATGGGTTTCCCTAAGGTGATGCAGAAAATAGTTGCACTAGAGTCTTATAATGGAAGTCAAGATTATGTTCATTCTTTATTTAAGAAAATGTTGCGAAGCTCTACAAAAATTTCAAATGAGCCTCGAAAAGCAAAGGATATTGTGAGTGAGGAAATCTCATTTAAATTTGAAAATATATATTGGTGTATGAATAGGACTGCTTCTAAAGGGATAAAGTATCCTGTTGATGTTGCTGAGCCTGAGAACAAGAAAACTGCTGCTCTAGTGGATGGGGGCTGCGCAATAGATGCAAGCAACCCTGCATTTGCTAATGAGAGTGATCAGTGCAATCCTGATATGACCCTATCTGATGATCTATCATCATCTAGGGATGGAATACTGTATGGGAGAAAATTTACATCTTTATCTGCAGACTACTTTCTTGGAGCTGTTCATGATACAACAGCAGATGCTGGTGTTGGTCAGACTCTATTTCCTAGTATCTTTTCAGATTATCATATTGATTCATTAGCTACATGTGATAGTGCATCTATGGGGTGCAAACTTGCGATTGATGATAAGGAATTGTTTAATACCAAAGAAAGATACCTCTCAGATACTATAACTGACAACGAATCCAAAGTTGAGGTCTCAGCAAAAGAGAAACCTTATCATTCCCTTGCCAAGCAAGAACATGCTTTTTCTGGGGCTTTGGCCGGTGTATGTGTCAGCCTTTGTCTACATCCTATTGACACAATCAAGACGGTCATTCAGTCATGCTGTGCCAAAAAGAAGTCCATTTTTTACACTGGCAAATTAATTGTTTCTGATAGAGGTTTGCCTGGACTTTATCGTGGGATTACTACAAGCATTGCATGCTCAGCTCCAATTTCTGCAGTGTATACTTTCACCTATGAATCAGTTAAAGCAGCTTTGCTTCCTTATCTCCCAAAGGAATATTATTCTTTTTCCCACTGTGTGGCAGGTGGTTGTGCAAGCATTGCCACATCTTCTATTTTTACTCCAAGTGAACGAATAAAGCAGCAAATGCAGGTGGGGTCTCGTTATCGCAACTGCTGGCTTGCAATGGTTGAAATTATCAGAAAGGGTGGTTTTTATTCATTATATGCTGGTTGGGGAGCTGTACTTTGCCGGAATGTCCCACATTCAATTGTCAAGTTTTACGTATATGAAAGGTTGAAGCAAGTAATGTCATCTTTTCCACCGAGTGTAAGGCCTTATACATTCCAGACTTTACTCTGTGGAGGATTAGCTGGATCTACTGCTGCTTTTGTCACCACACCTTTTGATGTTATCAAGACAAGATTACAGACACAGACTCCTGGATCTGTAAATCAATATGATAGCGTGTTTCACGCCCTTTGCAAAATAGGAAAGAATGAAGGTGTGAGGGGACTGTACAGGGGACTGACTCCAAGATTAATTATATACATGTCTCAAGGATCTCTGTTCTTTGCTTCATATGAATTTTTCAAGAGACTATTTTCTTTAGAAGCATAG 3384 0.4034 MVFLDLLTIGIWNTAQPNGLVVPDASMHSVNSMKDVLELMNIGQMNRATSVTALNERSSRSHSVLTVHVRGTDLGTNTILRSCLHLVDLAGSERVDRSEATGDRLKEAQHINKSLSALGDVIFALAQKSQHVPYRNSKLTQLLQSSLGGQAKTLMFVQLNPDIASYSETISTLKFAKRVSGVELGAARSNKEGKDVRQLMEQLTYLKDAVMRKDEEIERLQMFKANYENSKQGMISPRHESSIHRSQPIRTPRHGQKLLGIGQKPGSDMGNCSEYDEKHSEPGFSYSMDELSKNPDSLQLKLTREDKDKNFNEVDQLLGTGDANIEERLSDISDGDLSMGTETDRSINSIVEYTLFPEAEKSAVLTPPRRITEIIPAEDTEKRFTMPSSLKISRSSQVLHRVQMKSSRMSLNRSSSKVISNQPASMRLYRKDRDLDHSYATKEVLLMTAQLSFTTREPHSHNVTCSHSAFPIKISSGSLLQGDNKRFENMSGHNSSHRSNQHSIKYNRNQHRFPPFEADISCVNYKPSLSNDEAKQFHKNPNLKSPEIISTARFISALGHIRDSASQSLSCVRSKQIVNQDDICFQKGKVLINYGEKKDERAYGSNDTNYSAVNVRDASFVSSSMPANMGFPKVMQKIVALESYNGSQDYVHSLFKKMLRSSTKISNEPRKAKDIVSEEISFKFENIYWCMNRTASKGIKYPVDVAEPENKKTAALVDGGCAIDASNPAFANESDQCNPDMTLSDDLSSSRDGILYGRKFTSLSADYFLGAVHDTTADAGVGQTLFPSIFSDYHIDSLATCDSASMGCKLAIDDKELFNTKERYLSDTITDNESKVEVSAKEKPYHSLAKQEHAFSGALAGVCVSLCLHPIDTIKTVIQSCCAKKKSIFYTGKLIVSDRGLPGLYRGITTSIACSAPISAVYTFTYESVKAALLPYLPKEYYSFSHCVAGGCASIATSSIFTPSERIKQQMQVGSRYRNCWLAMVEIIRKGGFYSLYAGWGAVLCRNVPHSIVKFYVYERLKQVMSSFPPSVRPYTFQTLLCGGLAGSTAAFVTTPFDVIKTRLQTQTPGSVNQYDSVFHALCKIGKNEGVRGLYRGLTPRLIIYMSQGSLFFASYEFFKRLFSLEA 1127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0672 1127 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 16 220 IPR027417 -
Lele50g0672 1127 ProSiteProfiles Kinesin motor domain profile. 1 182 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele50g0672 1127 Pfam Mitochondrial carrier protein 852 933 IPR018108 -
Lele50g0672 1127 Pfam Mitochondrial carrier protein 942 1025 IPR018108 -
Lele50g0672 1127 Pfam Mitochondrial carrier protein 1036 1124 IPR018108 -
Lele50g0672 1127 FunFam Kinesin-related protein3 19 224 - -
Lele50g0672 1127 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1034 1122 IPR018108 -
Lele50g0672 1127 SMART kinesin_4 1 190 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele50g0672 1127 SUPERFAMILY Mitochondrial carrier 852 1119 IPR023395 -
Lele50g0672 1127 PRINTS Kinesin heavy chain signature 83 101 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele50g0672 1127 PRINTS Kinesin heavy chain signature 132 153 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele50g0672 1127 PRINTS Kinesin heavy chain signature 52 69 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele50g0672 1127 Pfam Kinesin motor domain 16 180 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Lele50g0672 1127 Gene3D Mitochondrial carrier domain 942 1126 IPR023395 -
Lele50g0672 1127 Gene3D Mitochondrial carrier domain 820 941 IPR023395 -
Lele50g0672 1127 FunFam Mitochondrial substrate carrier protein-like 827 974 - -
Lele50g0672 1127 Gene3D Kinesin motor domain 10 224 IPR036961 -
Lele50g0672 1127 PANTHER KINESIN-LIKE PROTEIN KLP-3 10 387 - -
Lele50g0672 1127 ProSiteProfiles Solute carrier (Solcar) repeat profile. 848 932 IPR018108 -
Lele50g0672 1127 FunFam Mitochondrial substrate carrier protein-like 975 1127 - -
Lele50g0672 1127 ProSiteProfiles Solute carrier (Solcar) repeat profile. 941 1024 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0672 Lele-ChrLele50 4130217 4138331 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0672 19 216 Calmodulin-binding Proteins AT5G65930 43.216 1.91e-36 148
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele50g0672 50 4130217 4138331 Lele50g0672 50 4130217 4138331 ECH
Lele50g0672 50 4130217 4138331 Lele52g0664 52 4201518 4209669 hybridization