Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele50g0664 ATGGATGGGAGAGAAGCTATGGCATTCTCTGGAGGTCCTCCCTCATATTACATGCATAGAGGAGGCATTGTTGGGTCGGTCTCTGGAACACATTCCGGAGGATTTCAAGTGCCTCCTGGGTTCAGACCAAACGCCGGCATTCCAGCACAGTCAAATGTACGGGGTAGCTCTATGGGTTCTACAGTTACAGTAGAACCTGCTCATACTAATTATAGTCATAGTCATGGCATTAGCATTAGTTCGTCTCCTGGAGTACCTCCTTCAAGCGATCGTGTGAAAAAGAAACGAGGAAGGCCCCGTAAATACCGTCCTGATGGACCCGTTTCTCTGGATCTGTCTCCCATGTCTGCCACTGCAAATTCTACCCCTGCCTCTAGCACTCCATCCCAGAAGCGAGCTAGAGGACGCCCACCTGGAAGTGGAAGAAAACAACAACTAGCCTCGCTAGGTGAATGGATGAACAGTTCTGCAGGGATGGCTTTTGCACCTCATGTTATCACAATTGGAGCTGGGGAGGACATTGTAGCAAAGTTACTGTCCATTTCACAGCAGAGATCTAGGGCTCTGTGCATCTTGTCAGGAACAGGGTCAGTTTCATCAGTTACTCTGCGGCAGCCTGCTTCTACTGTTGTCAGCATCACTCTTGAGGGCCGATTCCAAATATTACACTTGTCTGGTTCTTACCTGGTTGCTGAAGATGGTGGACACCGCGATAGAACAGGTGGCATGAGTGTTTCCCTTGCTAGTCCTGACGGTCATGTTATTGGTGGTGGGGTTACTGTGCTTATTGCTGCAAGCCACGTGCAGGTGGTGGTGTGCAGTTTTATATATGAAGGGTCCAAGACCAAGACTAAGCAAGAGAGTGCCCCTCAGGGCGATGTTTCTGAAGCCGAGCATGATAACAGGTTAGCTACTCCGGCGAGTGCTCCGCGGTCTCAAAACTACAGTCAACCAACAAGAGGCATTTGGCCATCCGATCTGACAAGTACACACACTGGTATTGACTTGATGCATGGATAA 1020 0.4951 MDGREAMAFSGGPPSYYMHRGGIVGSVSGTHSGGFQVPPGFRPNAGIPAQSNVRGSSMGSTVTVEPAHTNYSHSHGISISSSPGVPPSSDRVKKKRGRPRKYRPDGPVSLDLSPMSATANSTPASSTPSQKRARGRPPGSGRKQQLASLGEWMNSSAGMAFAPHVITIGAGEDIVAKLLSISQQRSRALCILSGTGSVSSVTLRQPASTVVSITLEGRFQILHLSGSYLVAEDGGHRDRTGGMSVSLASPDGHVIGGGVTVLIAASHVQVVVCSFIYEGSKTKTKQESAPQGDVSEAEHDNRLATPASAPRSQNYSQPTRGIWPSDLTSTHTGIDLMHG 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele50g0664 339 MobiDBLite consensus disorder prediction 49 87 - -
Lele50g0664 339 ProSiteProfiles PPC domain profile profile. 156 300 IPR005175 -
Lele50g0664 339 SUPERFAMILY AF0104/ALDC/Ptd012-like 160 278 - -
Lele50g0664 339 MobiDBLite consensus disorder prediction 113 133 - -
Lele50g0664 339 CDD DUF296 163 275 IPR005175 -
Lele50g0664 339 MobiDBLite consensus disorder prediction 306 332 - -
Lele50g0664 339 Pfam Plants and Prokaryotes Conserved (PCC) domain 163 275 IPR005175 -
Lele50g0664 339 Gene3D - 163 295 - -
Lele50g0664 339 MobiDBLite consensus disorder prediction 29 146 - -
Lele50g0664 339 MobiDBLite consensus disorder prediction 284 339 - -
Lele50g0664 339 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 68 308 IPR039605 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele50g0664 Lele-ChrLele50 4073696 4076411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele50g0664 1 324 AT-hook Motif Nuclear Localized (AHL) Family AT1G63470 49.030 2.93e-95 286